Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc238g00007 ATGGAGATTAGTGCCATCATGGCTTCAGCAACTCCAAGACCATCTCTTCCAACTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAGTCTCAAACTCAAAGTTGCCACTGTTGAAGCGCTCATCACACATAACACTTCCAACCTCAACTACCATTTCACTCCTCGCACTCTTTTCACCACCCCACGAAGCCAAAGCTGCTCTCACCATCCCCAAGGACCAGATTGTCTCTTCTCTCAACGATGTGGAGAAGACGATCGATCAGGTTCAGGTGGTGGGTTCGAGTGTTTTTGATGCGGCACAGCGTGTTTTTGAGATTGTAGGGAATGCTTTGAAGCCTGGAATCGATGCGGCGATGCCGATTGTGCAGCAGGCTGGGGAGGAGGCCTTGAAGATAGCTTCCCCTGCCATCTCTGAAGCTTCCAAGAAGGCACAAGAAGCACTTCAGAGCACTGGTGTTGACCCTCAACCTGTCATCACTGCTGCCCAGACAGTCGTGGACACAGCGCAACAAACCACCAAGGTGATTGAAGGTGCCAAGCCAATAGCTTCGGCGACTGTCGAAACCATATCTTCTTCAGATCCTACTGTGATTGCTGGAGCAGCTGGAGCAGCATTTATTGCATACCTCTTACTTCCTCCAATTTGGTCTGCCATCACCTTCAACTTCCGTGGTTACAAAGGTGAGCTTACACCTGCTCAAACCCTTGATCTGATATCAACACAAAACTACTTCATGGTTGATATTAGATCCGAGAAAGATAAGGACAAGGCCGGTGTTCCTCGCCTTCCTTCTAGCGCCAAAAACAGATTGATTGCCATTCCATTGGAAGAATTGCCAAGCAAGCTAAGAGGACTTGTTAGGAATGTAAAGAAAGTGGAAGCTGAAATAGCAGCTTTGAAGATTTCTTACTTAAAGAAGATCAACAAAAGCTCCAACATTGTGATCATGGACTCGTACTCGGACTCGGCGAAAATAGTAGCGAGAACATTAACGAGCCTTGGTTTCAAGAACACGTATATCGTGGCGGACGGATTCTCGGGAAACAGAGGGTGGTTACAGAGTAGATTAGGAACAGATTCATACTTTTCTTCGTTTGCAGAGGTGCTGTCTCCATCCAGAGTGATCCCTGCAGCTGTTAGAGGTTTTGGGACAACCTCCCAATCCAGTGCAAAACTTCTTCCAGGAGCTGATTGA 1215 0.4691 MEISAIMASATPRPSLPTPSSSSSSSSSSSSSSTLVSNSKLPLLKRSSHITLPTSTTISLLALFSPPHEAKAALTIPKDQIVSSLNDVEKTIDQVQVVGSSVFDAAQRVFEIVGNALKPGIDAAMPIVQQAGEEALKIASPAISEASKKAQEALQSTGVDPQPVITAAQTVVDTAQQTTKVIEGAKPIASATVETISSSDPTVIAGAAGAAFIAYLLLPPIWSAITFNFRGYKGELTPAQTLDLISTQNYFMVDIRSEKDKDKAGVPRLPSSAKNRLIAIPLEELPSKLRGLVRNVKKVEAEIAALKISYLKKINKSSNIVIMDSYSDSAKIVARTLTSLGFKNTYIVADGFSGNRGWLQSRLGTDSYFSSFAEVLSPSRVIPAAVRGFGTTSQSSAKLLPGAD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc238g00007 404 Gene3D - 234 371 IPR036873 -
Stsc238g00007 404 ProSiteProfiles Rhodanese domain profile. 246 367 IPR001763 -
Stsc238g00007 404 CDD RHOD 240 354 - -
Stsc238g00007 404 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 216 360 IPR036873 -
Stsc238g00007 404 Coils Coil 289 309 - -
Stsc238g00007 404 MobiDBLite consensus disorder prediction 11 35 - -
Stsc238g00007 404 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 27 365 IPR044690 GO:0009704|GO:0071277|GO:0090333
Stsc238g00007 404 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc238g00007 Stsc-Chr238 32334 34829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc238g00007 37 325 Sulfurtransferasese or Rhodanese AT5G23060 73.448 3.44e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc238g00007 - - adu:107469155 691.034