Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc237g00002 ATGACAAGAAATGGTAATGATGAAGCTGGGTTAGAATTAATGGAGCAGTTTCTTTGTGAGGTCGAGGAGGAGTATATTCCGAAGGTTGGAATGACGTTTGAGACACTTGAGGAAGCTAGGTTGTTTTATAAAGAGTATGCCAAACGTGGAGGATTCTCAACGAAAATAAGGAACACAAATAGAAGTAAGTGTACCAAGGAAGTTATTAATCAACTCATAACATGCAACAAAGAAGGGAGATGGATATCCAAAGTACCACGTACTGAGAAGACGAACCCTATTTGTGGAGCTAAATGTCCAACTCGAATATTCATTCATCTAGAAAAGAAGACAAGGCGGTGGCTTATTTCAAAAGTTGTTCTTGGCCATTCACACCCTTGCTTTCCTGACCAGTGTCAAATGCTGGCACAACACATGGAGTTAAGTTTGGATGTTCGTTGA 441 0.4014 MTRNGNDEAGLELMEQFLCEVEEEYIPKVGMTFETLEEARLFYKEYAKRGGFSTKIRNTNRSKCTKEVINQLITCNKEGRWISKVPRTEKTNPICGAKCPTRIFIHLEKKTRRWLISKVVLGHSHPCFPDQCQMLAQHMELSLDVR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc237g00002 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 128 - -
Stsc237g00002 146 Pfam FAR1 DNA-binding domain 42 129 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc237g00002 Stsc-Chr237 12283 12832 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc237g00002 FAR1 6.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc237g00002 - K17604 aip:107636690 158.303