Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2360g00001 ATGGCATGTCTTACCTCTGTTCACTTAGACTCCAACAACTATGATAACCCATTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGCAGCTAGTAACAACTGTTATGTCCCATTTGGCGGTGGACAGAGATTATGCCCTGGCTGGGAACTCTCTAGGCTAGAACTTGCTATATTCCTTCACCATCTTGTCACTACTTACAGATGGGTGGCGGATAGAGATGAAATACAATACTTTCCAACGGTGAAGATGAAAAGAAAGCTGCCAATAATTAGCGTAGAACCCATTAATGCATGA 300 0.4233 MACLTSVHLDSNNYDNPFKFDPWRWEKIGAAASNNCYVPFGGGQRLCPGWELSRLELAIFLHHLVTTYRWVADRDEIQYFPTVKMKRKLPIISVEPINA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2360g00001 99 Gene3D Cytochrome P450 1 94 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2360g00001 99 PANTHER CYTOCHROME P450 26 1 71 - -
Stsc2360g00001 99 Pfam Cytochrome P450 2 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2360g00001 99 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 40 49 IPR017972 GO:0005506|GO:0016705
Stsc2360g00001 99 PRINTS E-class P450 group I signature 37 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2360g00001 99 PRINTS E-class P450 group I signature 47 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2360g00001 99 PRINTS E-class P450 group I signature 3 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc2360g00001 99 SUPERFAMILY Cytochrome P450 2 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2360g00001 Stsc-Chr2360 1 714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2360g00001 2 91 Cytochrome P450 AT5G05690 43.478 3.25e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2360g00001 K12637 - gmx:100799030 178.718