Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc235g00002 ATGGCTTCCTCCGTACCTCTAACCACCGCCTTCTCCACCCTTCCTTCTCTCCGACAACGCCCTCACTCAAACCACCTAACTCCATCTCTCTCATATCCTCCAAAACGCCGCCGTTTCACTCCGCCACTCCAACACTCTTTCAACGTCAACACCAAACACAATTGGAGCCCCAAAAAACTATCCAATGTAAGTAGCATAGTCAGAGCTTCAGCCGCCGGAGCTTCTGTAACTCCGGCACCGGCACCGGCACCGGCATGGCAAGGCGCAGCCATAAAGCCTCTTCTAGCTTCCATAGCCACTGGAGCTATCATCTGGTTCGCTCCCGTCCCCAACGGCGTCTCCAAAATCGCTTGGCAGCTGCTGGCAATTTTCCTGGCCACCATCGTCGGAATCATCACGCAGCCACTTCCACTCGGCGCGGTGGCGCTGTTAGGCCTCGGCGTATCGGTCCTCACCAAAACCCTAACGTTCGCGGCGGCGTTCTCCGGCTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAAACCGGTCTCGGAAACCGCGTCGGTTACCAGTTCGTCTCCCTCTTCGGTAGCTCCACGCTAGGGTTAGGTTACAGCCTGGTGTTCAGCGAGGCCTTGCTTGCGCCGGCGATTCCGTCAGTTTCGGCGAGAGCCGGAGGTATCTTCCTCCCGCTGGTGAAGTCTCTGTGCGCCGCGTGCGGCAGCAACCCCGGCGACGGAACAGAGAGGAAGCTCGGAGCGTGGTTGTCGCTAACGTGTTTTCAAACGTCGGTGATATCTTCGGCTATGTTCCTGACGGCGATGGCGGCGAACCCTCTGTGCGCAACTCTGACTCAGACCTCAATCAACCAAACGATTGGTTGGTTGGACTGGGCCAGAGCCGCCATTGTTCCCGGTTTGGTGTCGTTGGTGGTAGTTCCATTGTTACTATACATCGTTTACCCTCCAACTCTGAAATCAAGCCCCGATGCTCCGAAGCTTGCTCGTGAGAAGCTGCAGAACATGGGTCCTATGTCTTCTAATGAGAAGATTATGACTGCAACCTTACTTCTTACGGTGGGACTTTGGGTGTTTGGAGGGGTTCTTAACATAGATGCTGTAACTGCTGCGATTCTTGGATTGGCGGTGCTTCTTGTTACAGGGGTTGTTACATGGAAAGAGTGCTTAGGAGAGGGTGTTGCATGGGATACTCTCACATGGTTTGCTGCTCTCATTGCCATGGCTGCTTACTTGAACAAATACGGCCTCATTGCTTGGTTCAGCCAAACTGTAGTCAAGTTTGTGGGAGGATTAGGTCTGTCATGGCAACTATCATTTGGGATTCTAGTGCTCTTGTATTTCTACTCACATTACTTTTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCCTTCCTCTCTGTTGCCACTGCGCTGGGGACTCCGCCATTCTTTGGAGCCATGGTGCTGTCATTCCTGTCCAATCTCATGGGTGGTCTTACTCACTATGGAATTGGCTCAGCTCCTGTATTCTATGGAGCCAACTATGTTCCCCTTGCTCAATGGTGGGGCTATGGCTTCCTTGTCAGTGTTGTTAACATTATTATCTGGCTGGGTCTTGGTGGTGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1671 0.5296 MASSVPLTTAFSTLPSLRQRPHSNHLTPSLSYPPKRRRFTPPLQHSFNVNTKHNWSPKKLSNVSSIVRASAAGASVTPAPAPAPAWQGAAIKPLLASIATGAIIWFAPVPNGVSKIAWQLLAIFLATIVGIITQPLPLGAVALLGLGVSVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVGYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERKLGAWLSLTCFQTSVISSAMFLTAMAANPLCATLTQTSINQTIGWLDWARAAIVPGLVSLVVVPLLLYIVYPPTLKSSPDAPKLAREKLQNMGPMSSNEKIMTATLLLTVGLWVFGGVLNIDAVTAAILGLAVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAAYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSVVNIIIWLGLGGVWWKAIGLW 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc235g00002 556 Pfam Sodium:sulfate symporter transmembrane region 93 556 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc235g00002 556 CDD ArsB_NhaD_permease 128 550 - -
Stsc235g00002 556 MobiDBLite consensus disorder prediction 17 36 - -
Stsc235g00002 556 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 46 556 IPR030676 -
Stsc235g00002 556 NCBIfam DASS family sodium-coupled anion symporter 108 550 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc235g00002 Stsc-Chr235 8442 11009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc235g00002 80 555 Antiporters AT5G12860 85.294 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc235g00002 - - gmx:100793559 833.558