Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2349g00001 ATGGAACATTTATGTGGTGCTAGGTTTGGGAAGGTGATTAATAAGGCAAGGCCTTATTTACTAACTGTGGGATTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCTAGCCTTAACCATGGAATGAATCGTTTGGTCTTTATTGTATATCGTAATGCCATCGCTGCTTTGTCCCTTGCTCCTTTTGCATTGATTTTTGAAAGGAAAGTGAGGCCAAAGATGACAATCTCTGTATTCTTTCAGATAGTTGCTCTTGGATTTCTAGAGCCGGTGATTGATCAAGGGTTCACATTCTTGGGGATGCAATACACTTCGGCTTCATTTGCATCAGCTGTTATGAACGCTGTGCCCTCTGTCACCTTTGTGCTTGCAGTCCTTCTCAG 389 0.4344 MEHLCGARFGKVINKARPYLLTVGLQFGMAGTYLFTMASLNHGMNRLVFIVYRNAIAALSLAPFALIFERKVRPKMTISVFFQIVALGFLEPVIDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVLL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2349g00001 129 PANTHER WAT1-RELATED PROTEIN 18 127 IPR030184 GO:0016020|GO:0022857
Stsc2349g00001 129 Pfam EamA-like transporter family 29 129 IPR000620 GO:0016020
Stsc2349g00001 129 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2349g00001 Stsc-Chr2349 5297 7162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2349g00001 13 129 Nodulin-like Gene Family AT4G08290 67.521 4.03e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2349g00001 - - gmx:100777641 223.016