Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2345g00002 ATGACTTTCCATACACTTGAAGATGCTTTTGCTTTTTATAAAGAGTATGCTAAACGTGTTGGATTCTCTACTAAGATAAGGAACACTAATAGGTGCAAGGAGACCAAGGAAATAAAGAACCAACTTATCACATGTAATAGGGAGGGGAAATGGACTTCTGAGATACCGTGTGTGGAGAAGACTAATCCTATGTGTGGTGTGAACTGTCCTGCTAGGATTTATGTGCACATAGTGAAGAAAACGTTACGTTGGTGCATTTTAAAGGTGGTTCTTAATCATTCACACCCGTGTTGCCCGGATGAATCTCAGATGTTGCCTCAGCATAGGGAGTTAAGTATGCAAGTTTGCCGCACTATTGAAATTAATGAGGAAGCTGGCATTAAACCAAATCAAACATACAAAGCGCTTGTGGCAGCTTCCGGTGGGCACAACGAGTTGGGATTCATTGAAAAAGATGTCAGAAATTTCATTACAAGGGATATTCGGAACGTTTCAGAAGATCAAGATGCGAACGAGCTTGGAGGTTACTTATATAGAATGAAGGAGCAAAACAAAGATTTCTTTTATGAAATCGCTCTTGACGGTGATAACAGGATAAAGAACGTGTTCTGGGCGGATGCAAGGAGCAGGGCTGCGTGTGAATATTTTGGAGACGTTGTTTGGTTTGAAACAACGTATAATAAAAACAGATACGATCTTCCCTTTGCTTCTTTTGTTGGGGTTAATCATCATGGCTACTCCATACTCCTTGGATGTGCTGTAATGAAGAATGAGGACATTGAATCATTCAAATGGCTTTTCGGTTGTTGGATTCGTTGTATGGGAGGGAAGGCACCAAAAAGCATCATTACGGACCAATGTCCGTCGATGCCAATCGCGATTCAGCACTGTATGCCAACAACCATGCATAGGTGGTGCATTTGGCATATCATGAAGAAGGTTCCTAAAAAATTGAACGGATTCAAGGCCCACGTTAACATCGAACAAGAGATGAGTCAGATCGTGTGGTCATCTATGTCATCAGATATCTTTGAAAGAGACTAG 1044 0.4128 MTFHTLEDAFAFYKEYAKRVGFSTKIRNTNRCKETKEIKNQLITCNREGKWTSEIPCVEKTNPMCGVNCPARIYVHIVKKTLRWCILKVVLNHSHPCCPDESQMLPQHRELSMQVCRTIEINEEAGIKPNQTYKALVAASGGHNELGFIEKDVRNFITRDIRNVSEDQDANELGGYLYRMKEQNKDFFYEIALDGDNRIKNVFWADARSRAACEYFGDVVWFETTYNKNRYDLPFASFVGVNHHGYSILLGCAVMKNEDIESFKWLFGCWIRCMGGKAPKSIITDQCPSMPIAIQHCMPTTMHRWCIWHIMKKVPKKLNGFKAHVNIEQEMSQIVWSSMSSDIFERD 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2345g00002 347 Pfam FAR1 DNA-binding domain 12 98 IPR004330 -
Stsc2345g00002 347 PANTHER OS01G0519700 PROTEIN 1 346 - -
Stsc2345g00002 347 Pfam MULE transposase domain 219 313 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2345g00002 Stsc-Chr2345 4365 6784 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc2345g00002 MULE 1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2345g00002 - - aip:110271906 427.172