Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2336g00001 ATGGTGAGCATCAAATCTATCCACACAGTTGTTCCTAGTGAGGCTACCCCAAATGGAACTTTCTTGCTCTCTCAGAGTCAGCAAATCAAGGCTCATACTCAGGCACTCACAATTTACATTTACAACTCAAATCATAACCACAACATAATTGATACAATGAGACACTCTCTTGCCAAGATCTTAGTCCATTACTACCCACTAGCTGGCCGCCTTCGCATGATCGAAGGCGGAAGAATGGAAGTTGAGTGCAACAACAAGGGTGTATTGCTGTTGGAAGCTGAATCCACCAATACACTCCAAGACTACGGTGATTTCGAGCCCAACGACGCCTTGCGCCCGCTCCAACCGGCGGTTGATTACAGTGAACCAATGGAAAACCTGCCACTTGTTATGGTGCAGCTGACGAGATTCGCCTGCGGTGGAGTCTGTGTTGGGTTTGGAATCTCCAATGTCGTTGTGGATGGAATCTCTGGCACTCTCTTCGTTGACGCTTGGGCTAAGCTGGCTCGTGGTGGAACTTTGGGAGAAGATGAGAAGCCGTTGTTTCTTGATAAAATGGCGATTCTGAAAGCTGAGACTAATGATGAGAAACCGTTTACCGCATCGCGCTTTGAGCACCGTGAATTCAAGCAGCTTCCGGTGATGATTGGTAGGTGTGATGCGAGTGAGGAGAGCAAGAAGGAGACGGATCTTGCAATTCTGAAGCTAACAAGGGAGATGGCGGAGAAGATAAAGAAGAAAGCCAATGATGATGGATGCTTGGAATTTGATCACGAGGCAGTTACGGCGCAGAAGCATTGGCGACCCTATAGTAGGTACGAAAGCATAGCTGCTCATATATGGAGGAGTGCATGCAAGGCACGCAATGCGGATCACAACCAACCCACGGTGGTTCTCACTGTTGCCGGTATCCGTAACAGGCTCAAGCCACCTCTTCCTCTTAACTACTTTGGGAACGCCACACATCCAACTGTGACACCCACATGCCTCAGTGGCGACATTGCTTCAAAGCCACTAAGATATGGTGCCCAGAAGATCAGAGAAGCCATCGAGTTGCTGACAGATGAGTACTTGAGATCAGCCTTTGAATTCATTGAGAGGCAGGACCATTTAGGGTGTCTCAGACCAAAGTTGAACCGTGAATCAGGGTGTGTTGAAGGCCCGTTTCTTGGGAACCCAAACCTCAACATATGGAGTTGGATGAGTAATATGCCTACATATGGACCGGATTTTGGATGGGGAAGGCCGGTGTATATGGGACCAGGTGAGATAACAGGAGATGGGAGGGCATTTATAATGCCAGCTGCCAGTGGAGAGGGGAATCTTTCAGTTGCTATTCGGTTGCAGACTCCTCATGTTGAACCATTCGTCAAGTTCTTCTATCAGGACATATGA 1395 0.4824 MVSIKSIHTVVPSEATPNGTFLLSQSQQIKAHTQALTIYIYNSNHNHNIIDTMRHSLAKILVHYYPLAGRLRMIEGGRMEVECNNKGVLLLEAESTNTLQDYGDFEPNDALRPLQPAVDYSEPMENLPLVMVQLTRFACGGVCVGFGISNVVVDGISGTLFVDAWAKLARGGTLGEDEKPLFLDKMAILKAETNDEKPFTASRFEHREFKQLPVMIGRCDASEESKKETDLAILKLTREMAEKIKKKANDDGCLEFDHEAVTAQKHWRPYSRYESIAAHIWRSACKARNADHNQPTVVLTVAGIRNRLKPPLPLNYFGNATHPTVTPTCLSGDIASKPLRYGAQKIREAIELLTDEYLRSAFEFIERQDHLGCLRPKLNRESGCVEGPFLGNPNLNIWSWMSNMPTYGPDFGWGRPVYMGPGEITGDGRAFIMPAASGEGNLSVAIRLQTPHVEPFVKFFYQDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2336g00001 464 Gene3D - 1 211 IPR023213 -
Stsc2336g00001 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 449 - -
Stsc2336g00001 464 Gene3D - 218 463 IPR023213 -
Stsc2336g00001 464 Pfam Transferase family 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2336g00001 Stsc-Chr2336 84 1975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2336g00001 2 462 Monolignol Biosynthesis Gene Families AT5G48930 36.285 1.39e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2336g00001 K13065 - gmx:100779652 566.229