Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc232g00001 ATGGAGCAGCTAAACGCAATAATGCCCAACAACAACATCGACTTTGCTGCTGGTGGTGGTGCTGGATCATCATCAACACCACCACTACTATATGATTTTTCATCACTTGCAAATGGAACCTTCTTCAACCAACAACAAGGGTTTAGCAGCAGCATCAATAATGATGCTGTTGCAGGCCCTTCTAATTTTTCATCACTTCTTCATCATCATCACAACTTTGTTCCAACATCACCAATAATTATTGGTGATAATAATAACAATAATAATAATTTGCAGCATCAGCAGCAAGGTGTGGGAGTAGTAATGGAGGGTGCAGTGGCTTCTGAGGTTGCGGCGACCGCCATGGATGAACTGCTTAGGCTTGTTCGGATCAATGAGCCATTCTGGATTGGTTCTGCTTTTGATGGGAAGCTTGTGCTTCATGGTGAAAGCTATGACAGGATGTTCCCTAGGGTTAATCAATTCAACGATGGGAATTCTCGTGTGGAATCTTCAAAGGAAACAGGGATTGTCAACATGAGTGGGATTCAACTCGTTGATTTGTTTCTTGATTCGATGTATGAAGAAATTCACGGATTTTCACCATTGGTGGCATCTCGTGAATTCCAGTTCCTCCGATTCTGCAATCAACTGGAGCCTGGATTGTGGATCATAACAGATGTCTCTTTCGATTCGATTCGAGACCACTCCTTTCGCCTTTCTCTTTCTCGCTCTCGTTCTTGGAAACGTCCCTCTGGATGCTTGATCCAGGAACTCCCCAACTCAGGTTCTTGCATGGTTACTTGGGTTGAACATGTGGAAGTGGATGATAAGATTCAGACACACCGGCTTTACAGAGATCTTGTTAGTACAAATGCTGTATTTGGAGCACAGAGATGGATGATGGAACTTCAAAGGATGTGCCACAGATCTTTTAGCTACGCTCTTGAAAATATACCTGAACAAGAATATGGTGGAGTGATAAATATAATTGAAGGAAGGAGGAGTGTGATGAAAGTAGGTGAGAGGATGCTGAGGATATTTAGTGAGAATTTGAACATGAGTGGAAGGGTTGAGTTTCCAGAGCTGAGTGTGGAGTACAACAATGGGGTTAGGATAGCAGCTAGAAGATGCAGAGAGAAAGGGCAACCAAATGGGACCATTATGATGGCTGCAACCTCTGTTTGGCTACCACACCATTACCATACAGTCTTTCAATTCTTAACTGATGTCAATAAACGCACTCAGTGGGATGTTATGTCTTGCATATCTCCAGTCCACAAGATTGCACACATTTCCAATGGAATTCATCCCGGCAACAATATATCAATTATTCAGCCATTCATCCCAAGCGAGAACAATGCCATAATAATTCAAGAAAGCTTCATAGACTCAGTGGGATCTTACATAGTGTACGCTCCATCCGATTTCGAAGCCATCAATATCGCCATTAACGGCGGCGACCCTTCTACCATCCCCGTCCTTCCCTCAGGATTTGTTGTGTGCGGAGATGGCAGAGAATCAATGATGAGCAACAGCAGCATTGCACCATCGATTTTTGGAGGAGCTGGTGGAAGCTTTACCGATCAGCTACTTAGATCAGAAGGAGGAGGCTCACTGCTGACAGTGGCATTCCAGATTCTGGTTAACAACATCACTAGTGGACCCAACCATGTGAGTATGGAATCTATGGCTTCTATTAATACCCTTATAACTTCAACCGTCCAGAAGATTAAGGCCGCATTGAATTGCAATGTCTTGCAATGA 1746 0.4353 MEQLNAIMPNNNIDFAAGGGAGSSSTPPLLYDFSSLANGTFFNQQQGFSSSINNDAVAGPSNFSSLLHHHHNFVPTSPIIIGDNNNNNNNLQHQQQGVGVVMEGAVASEVAATAMDELLRLVRINEPFWIGSAFDGKLVLHGESYDRMFPRVNQFNDGNSRVESSKETGIVNMSGIQLVDLFLDSMYEEIHGFSPLVASREFQFLRFCNQLEPGLWIITDVSFDSIRDHSFRLSLSRSRSWKRPSGCLIQELPNSGSCMVTWVEHVEVDDKIQTHRLYRDLVSTNAVFGAQRWMMELQRMCHRSFSYALENIPEQEYGGVINIIEGRRSVMKVGERMLRIFSENLNMSGRVEFPELSVEYNNGVRIAARRCREKGQPNGTIMMAATSVWLPHHYHTVFQFLTDVNKRTQWDVMSCISPVHKIAHISNGIHPGNNISIIQPFIPSENNAIIIQESFIDSVGSYIVYAPSDFEAINIAINGGDPSTIPVLPSGFVVCGDGRESMMSNSSIAPSIFGGAGGSFTDQLLRSEGGGSLLTVAFQILVNNITSGPNHVSMESMASINTLITSTVQKIKAALNCNVLQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc232g00001 581 Gene3D - 160 292 IPR023393 -
Stsc232g00001 581 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 86 185 IPR042160 -
Stsc232g00001 581 SUPERFAMILY Bet v1-like 361 542 - -
Stsc232g00001 581 Pfam START domain 186 302 IPR002913 GO:0008289
Stsc232g00001 581 SMART START_1 109 303 IPR002913 GO:0008289
Stsc232g00001 581 CDD START_ArGLABRA2_like 105 301 - -
Stsc232g00001 581 SUPERFAMILY Bet v1-like 107 302 - -
Stsc232g00001 581 ProSiteProfiles START domain profile. 100 306 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc232g00001 Stsc-Chr232 2798 7108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc232g00001 72 576 Homeobox Transcription Factor Family AT1G73360 39.483 2.96e-112 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc232g00001 K09338 - gmx:100795075 496.893