Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc231g00002 ATGAAGGGTAGTGGTAGTGAGAAGAAGAGGAGTGAGAGTGAGAGGGAGAAGACCAAGATGAGGGAGAGGAAGAGAAGGGCAATTACCACCAACATATTCAGAGGTATAAGGAACCATGGCGGCTACCCTCTCAATAATCGATCAGATATCAACGCCGTTCTCCGCCACCTTGCCAACGAAGCTGGCTTCGTCGTTGACGAGGACGGCACCACCTATCGCTCCAACGCATCGGTGAAGTGTCCACTGTGTGGTTCTGCAACCGCGAATTTGTCATCAATGATGCCAAACGCCAACGGAACCGCCTCAACGACGTCGTTGCCAATGCCTGGCGTTGGAGATCCTGCACCTGCACCTGCACCTGCACCAGTTACTACTACTACAGCACCTGTCTCAGAAGGGCCTTCTTTCGAACGGTCTATTTCGGTGCCCATGTACACGTGTCAAGATCACGTGGCTGTTCACCGCTGTGGCGCCAACGGTGGAGATGCTGTGCCGTATTATGAGGATATGAAGCAGCAAAAAGTAGAAGAGGAAGAAGCGTTTTTTTGTTTCGAAGATGCTGCCAATATTCACAACAATTTGGTTGGGTCTATGCCTTTCTTTTAA 606 0.505 MKGSGSEKKRSESEREKTKMRERKRRAITTNIFRGIRNHGGYPLNNRSDINAVLRHLANEAGFVVDEDGTTYRSNASVKCPLCGSATANLSSMMPNANGTASTTSLPMPGVGDPAPAPAPAPVTTTTAPVSEGPSFERSISVPMYTCQDHVAVHRCGANGGDAVPYYEDMKQQKVEEEEAFFCFEDAANIHNNLVGSMPFF 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc231g00002 201 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 5 109 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc231g00002 201 MobiDBLite consensus disorder prediction 1 23 - -
Stsc231g00002 201 MobiDBLite consensus disorder prediction 115 135 - -
Stsc231g00002 201 Pfam BES1/BZR1 plant transcription factor, N-terminal 5 110 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc231g00002 Stsc-Chr231 9125 10578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc231g00002 3 118 Glycoside Hydrolase AT2G45880 39.098 5.75e-19 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc231g00002 BES1_N 4.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc231g00002 - K20818 twl:120013271 112.849