Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc22g00014 ATGTTTGGAGTCCAGAAGAAGATGCAAAGAAACTTGCATTTGTGTCAAAGCATGGAACTGGTAACTGGACTCCTGTCCCAAGAAAAGCGGGCCATTCACTCAGGGCTCAAGAGGTGTGGAAAGAGTTGCAGGCTTCGGTGGACCAATAATTATCTCAGACCTGATCTTAAGCATGACACATTTACATCCCAAGAAGAAGATCTTATCATTAAGCTTCATGCAGCCATAGGTAGCAGGTGGTTCATAATAGCCCAACAACTCCCTGGAAGAACAGACAATGATGTGAAGAACTATTGGAACACAAAGCTGAGAAAGAAGCTCTCTCAAATGGGAATAGACCCTGTTACTCATAAGCCCTTCTCAAAGCTGATTGCTGACTATGGAAACATTGAGGGTTCTCATGGCCAAAAACAACCAACTACACAAACTAGCTCTATCAACAACAAAGACTTCAAGAAAAGTTCAATTCTCTTAAACTCAGAGCAATACCAAACCCTGAAGCCACAGGGGTTTATTACTAGAATCACCAATGATAACAATAATAATAATTGCCAACAGCAAACATTGCAAATGGAACCAATTACTGATGAAACCAATAATCTTTCATTTAACCACTTAATGGATCTTACAATGACGCCAACAGTTATAGGTTCAACAAATTGCTGCATGGATAGAGAGAATCATGAGACCATTACTTCTTCGTCTTCTTCAACTTGTTCCACTCCGGCGCAAGAAGCCTCGCCGGTGGCATCACATTTCTGTTGGAATGACTTCCTTCTAGAAGACGCCTTTGTGCCAGCTACTGCTGATAACAATAATGATCAAGAAATGGTGGCGGCTGGTTTCTTGTCGAAGGAGTTACTTGTATGCCGAATTGAGAATGTATCGAGACTAAGTTGGAGCAAGAAAGAAGCGAGATCACAGCAAGAAGCAATTAGCAATAATGATTTTGAGCTCTCATCATCTTTGTCATCTTCATGTGAAACTTCGTTTGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTTCTTAGTTTTCCTCACCTTATGGAGGAACCATCTCACTACTAA 1071 0.409 MFGVQKKMQRNLHLCQSMELVTGLLSQEKRAIHSGLKRCGKSCRLRWTNNYLRPDLKHDTFTSQEEDLIIKLHAAIGSRWFIIAQQLPGRTDNDVKNYWNTKLRKKLSQMGIDPVTHKPFSKLIADYGNIEGSHGQKQPTTQTSSINNKDFKKSSILLNSEQYQTLKPQGFITRITNDNNNNNCQQQTLQMEPITDETNNLSFNHLMDLTMTPTVIGSTNCCMDRENHETITSSSSSTCSTPAQEASPVASHFCWNDFLLEDAFVPATADNNNDQEMVAAGFLSKELLVCRIENVSRLSWSKKEARSQQEAISNNDFELSSSLSSSCETSFVEAMLDQENEMFLSFPHLMEEPSHY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc22g00014 356 SMART sant 57 105 IPR001005 -
Stsc22g00014 356 PANTHER F14D16.11-RELATED 34 356 - -
Stsc22g00014 356 FunFam Os07g0634900 protein 60 119 - -
Stsc22g00014 356 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Stsc22g00014 356 Pfam Myb-like DNA-binding domain 60 101 IPR001005 -
Stsc22g00014 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Stsc22g00014 356 CDD SANT 60 103 IPR001005 -
Stsc22g00014 356 SUPERFAMILY Homeodomain-like 37 111 IPR009057 -
Stsc22g00014 356 Gene3D - 60 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc22g00014 Stsc-Chr22 126043 132147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc22g00014 34 352 MYB Transcription Factor Family AT3G28470 39.210 3.70e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc22g00014 Myb_DNA-binding 4.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc22g00014 K09422 - qsa:O6P43_030939 286.189