Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc226g00019 ATGATGAAGGGATTGGATGGGATTGATTCTCAACCAGGTTCCTCTTCCTCGCGAACGAGTTCCAAGATGCATCACCGAGCCACCTCTCAGACCATTCGACTCGGTCGAGTCCAGCCACAGGCACCTACCTACCGCACCATCTTCTGCAATGATCGTGAATCCGGTCTCCCCCTTCGCTTCAAGTTCAGACGGGTGGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATTAGTCCTGTCTCTCCAATTACTAATGTACTTCCTTTGTCCCTGGTGCTTCTCGCATCTCTTATTAAGGAAGCTTGGGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAAAATGATAGAAGTTTTGCAAGATCAACAGTGGGTTTTTGTACCCTGGAAAAGCTTGCAGGTGGGAGACATTGTCAAGGTTAAGCAGGATGAATTCTTTCCAGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAACTTGAAAATAAGAAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCACAGAAAGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCACTGTATACCTTTACTGGAAATCTTATATTGGACAATCAAACATTGCCTCTCAGTCCAAACCAAGTTTTGCTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTACAGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCGATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTGGACAAGCTCATACTTGCTCTATTTGTAACTCTCTTTGTGATGTGCTTCATTGGAGCCACTGGCAGTGCTCTCTTCGTTGACAAGAAATATTATTACTTGCATCTTGATTCAGTTGAGGAGGGGTCTTCACAGTTTAACCCTAACAACAGATTTTTGGTTCTTATTCTGACTATGTTTACCCTTATCACGCTATACTCTTCAATCATCCCCATCTCTCTTTATGTGTCTATAGAGTCAGCTCAGTTTATCAACAAGGACTTGCACATGTACCATAGAGAAACCAATACACCTGCACTAGCTAGAACGTCAAATCTGAATGAAGAACTTGGGCAG 1176 0.4201 MMKGLDGIDSQPGSSSSRTSSKMHHRATSQTIRLGRVQPQAPTYRTIFCNDRESGLPLRFKFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLASLIKEAWEDWKRFQNDMAINNKMIEVLQDQQWVFVPWKSLQVGDIVKVKQDEFFPADLLFMASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPQKASEFKGEIQCEQPNNSLYTFTGNLILDNQTLPLSPNQVLLRGCSLRNTEYIVTVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALFVTLFVMCFIGATGSALFVDKKYYYLHLDSVEEGSSQFNPNNRFLVLILTMFTLITLYSSIIPISLYVSIESAQFINKDLHMYHRETNTPALARTSNLNEELGQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc226g00019 392 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 61 392 - -
Stsc226g00019 392 MobiDBLite consensus disorder prediction 9 34 - -
Stsc226g00019 392 SUPERFAMILY Calcium ATPase, transduction domain A 120 264 IPR008250 -
Stsc226g00019 392 Gene3D - 100 268 - -
Stsc226g00019 392 Pfam E1-E2 ATPase 121 312 - -
Stsc226g00019 392 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 391 IPR023298 -
Stsc226g00019 392 FunFam Phospholipid-transporting ATPase 99 268 - -
Stsc226g00019 392 MobiDBLite consensus disorder prediction 1 34 - -
Stsc226g00019 392 Pfam Phospholipid-translocating ATPase N-terminal 60 89 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc226g00019 Stsc-Chr226 62811 69873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc226g00019 14 392 Primary Pumps ATPases AT1G59820 66.830 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc226g00019 K14802 - gmx:100815547 627.476