Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc226g00016 ATGGCAAAGAAGAGTGAGGTGAAGTTGTTGGGTGCATGGCCAAGTCCATTTGTGTTGAGGGCTAGAATTGCTCTTAACATAAAGTCAGTAGATTATGAGTTCCTTGAAGAGAATTTTCAACCCAAAAGCCAACTTCTTGTACAATCCAACCCTGTATACAAGAAAATCCCTGTTCTTATTCATCAAGATAAACCTATCTGTGAGTCCTTGATCATTGTTCAGTATGTTGATGATGTTTGGTCCTCCGACGGCCCTTCCATTCTCCCGGCGGATCCTTATGATCGCGCCGTTGCGCGATTCTGGGCAACTTATGTTGATGACAAGTTGTTCCCAGCCATGAAATCCATTGCAGGAGCAAAAGGAGAGGAAGAAAGAAAGAGGTTGATAAAGGAAGTGGAAGAAGGATTGGCACTACTAGAGGATGCATTTAACAAGATCACCACCAAAGGAAATAATAATTATTTGTTTTTTGGTGGTGACCAAATTGGGTACCTTGATATTGCATTTGGTAGCTTATTGGGGTGGCTAAGGGTGACAGAGATAAGCAATGGTGTGAAGTTGTTTGACCAAGTCAAAACACCTGGTTTGGTGAATTGGGCTGAGAGCTTCTCTTCACATGGTGCTGTCAAAGATGTTATGCCTCAGACTCATAACCTTCTTGAGTTTGCTAAGACACTTATGACCAAAATGGCTCATACAAATTAG 705 0.4199 MAKKSEVKLLGAWPSPFVLRARIALNIKSVDYEFLEENFQPKSQLLVQSNPVYKKIPVLIHQDKPICESLIIVQYVDDVWSSDGPSILPADPYDRAVARFWATYVDDKLFPAMKSIAGAKGEEERKRLIKEVEEGLALLEDAFNKITTKGNNNYLFFGGDQIGYLDIAFGSLLGWLRVTEISNGVKLFDQVKTPGLVNWAESFSSHGAVKDVMPQTHNLLEFAKTLMTKMAHTN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc226g00016 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 226 IPR010987 -
Stsc226g00016 234 Pfam Glutathione S-transferase, C-terminal domain 100 205 IPR004046 -
Stsc226g00016 234 CDD GST_C_Tau 92 226 IPR045074 GO:0004364|GO:0006749
Stsc226g00016 234 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Stsc226g00016 234 Gene3D Glutaredoxin 1 87 - -
Stsc226g00016 234 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Stsc226g00016 234 Gene3D - 88 233 - -
Stsc226g00016 234 SFLD Main.3: Omega- and Tau-like 3 232 IPR045073 -
Stsc226g00016 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 220 IPR045073 -
Stsc226g00016 234 FunFam Glutathione S-transferase U9 88 233 - -
Stsc226g00016 234 SUPERFAMILY GST C-terminal domain-like 79 229 IPR036282 -
Stsc226g00016 234 FunFam Glutathione S-transferase GSTU6 2 87 - -
Stsc226g00016 234 SFLD Main (cytGST) 3 232 - -
Stsc226g00016 234 CDD GST_N_Tau 7 80 - -
Stsc226g00016 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc226g00016 Stsc-Chr226 48569 49564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc226g00016 5 229 Glutathione S-transferase Gene Family AT1G10370 60.444 1.59e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc226g00016 K00799 - adu:110272419 357.066