Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2261g00001 ATGGCAAACCCTTCCATTTTCCTCTTCCTTACAATCTTCATTACCACACTCACATCATCACCACTTGTTTGTTCTTCTTCTTCTTCTAAAGAAGAAAAGAAGCAAGAGAGAACAACATTCATAGTCCAAGTGAAACACCACCTCAAGCCTTCTATTTTCCCAACCCACACTCAATGGTACCAATCCACACTCTCTTCACTACTCTCAACCACAACCACAACATCCAAACACGCCCTTAACAACAATAACCCCATTCTCCACACATACGACGCCGTTTTCCACGGCTTCTCAGCAAGGCTCTCACCTTCAGAGGCGAAGAAGCTACAAACACTCCCTCACGTGACCGCACTTATCCCTGAACAAGTTCGTCACGTGCACACCACGCGCTCTCCTCATTTTCTCGGCCTTCAAACCGCCGCTAAGACCGGCTTGCTTCGGGATACCGATTTCGGCTCCGATCTCGTCATTGGAGTTATCGACACCGGAATCTGGCCGGAGAGGCAGAGCTTCAATGACCGCGACCTAGCTCCCGTTCCCGCCAAATGGAAAGGACGCTGTGTTGCAGCAAAAGATTTCCCGGCCACCTCATGCAACCGGAAACTCATCGGCGCAAGGTTTTTCTCCGCCGGATACGAGGCTACCAACGGGAAGATGAACGAGACGGTGGAGTACCGGTCGCCAAGGGACTCCGACGGTCACGGCACGCACACGGCTTCAATTGCCGCCGGAAGGTACGTTTCTCCGGCTTCGACTCTCGGTTACGCAGCCGGTGTCGCCGCCGGCATGGCTCCGAAAGCCAGGCTTGCGGTTTATAAGGTGTGCTGGATCGGCGGATGCTATGACTCCGACATCCTCGCTGCATTTGATGCCGCCGTATCAGACGGCGTAGATGTAGCGTCGCTAAGTGTCGGTGGCGTCGTGGTGCCGTACCACCTCGACGTCATTGCCATTGGGGCCTACGGCGCCGCGTCACGCGGAGTTTTTGTCTCCGCCTCCGCCGGCAACGGCGGTCCTGGTGGCCTCACCGTCACAAACGTCGCTCCTTGGGTGACAACTGTTGGTGCCGGAACAATTGACCGGGATTTCCCCGCTCATGTTAAGCTTGGAAATGGTAGGGTTATAGCTGGTGCTAGTCTTTATGGTGGTCCGGGTCTAATTCCGGGTCGGATGTACCCGGTTGTGTATATGGGATCTGAAGTAAGTGGCGGTGGCAGTACTGGTGGTGGTGATGGTTATTCGGCTTCGCTTTGTTTGGATGGTTCCTTGGATCCCAAGTTAGTTAAGGGGAAAATTGTTGTTTGTGATAGAGGGATTAGTTCTAGAGCTGCTAAGGGTGAAGTTGTGAAGAAATCTGGCGGAATTGGCATGATTTTGGCCAATGGCATATTTGATGGTGAAGGTTTGGTGGCTGATTGCCATGTACTCCCTGCCACCGCCGTTGGTGCGGTTGGGGGCGATGAGATCAGGAGGTACATTGCGACTGTGGCGAAGTCCAATCACTCTTCGCCCCCAACTGCAACAATTATGTTCAAGGGTACTAGGCTTGGTGTTAGGCCAGCACCTGTGGTGGCATCATTCTCAGCTAGAGGGCCTAACCCAGTATCACCAGAGATTTTGAAACCTGATGTGATTGCCCCTGGATTGAACATCCTTGCCGCGTGGCCAGATAGGGTTGGCCCCTCCGGCGTTCCATCGGATAGGCGCAGAACCGAGTTTAATATACTCTCTGGAACCTCAATGGCTTGCCCTCATGTTTCTGGATTGGCTGCATTGTTGAAAGCGGCCCATCCAGATTGGAGTCCGGCTGCAATTAGGTCTGCATTGATGACCACTGCTTATGTTGTGGACAACAGGGGTCATGCCGTGTTGGATGAGTCCACTGGGAATGTTTCTTCGGTGTTCGATTATGGTGCTGGCCATGTACATCCGGAGAAGGCCATTGATCCTGGTTTGGTCTATGACATTTCGGATTCCGATTATGTGAATTTCTTGTGCAATTCAAATTACACCACTGACACTATCCAAGTGATCACAAGGAAGATTGCAAATTGCAGCGGAGCGAAGAAGGCCGGACATGCAGGGAACTTGAATTACCCCTCATTGTCAGCAGTTTTCCAGCAGTATGGCAAGAAGAAAATGTCCACGCACTTCATTAGATCCGTGACCAATGTTGGCGAGGCGAACTCAGTCTATAAGGTCACCATTAAGCCACCGGTCGGGATGATGGTCACGGTGGAGCCTCAGACCCTGTCCTTCAAGAGGGTGGGTCAGAAGTTGAACTTCCTTGTTAGGGTGCAAACTAGAGCACTGAAGCTTTCTCCTGGAGGCTCAAGTGTGAAGAGTGGTTCCATAGTTTGGTCTGATGGCAAACACACTGTCACAAGTCCCTTGGTTGTCACAATGCAACAGCCTCTTGATTATTAG 2424 0.519 MANPSIFLFLTIFITTLTSSPLVCSSSSSKEEKKQERTTFIVQVKHHLKPSIFPTHTQWYQSTLSSLLSTTTTTSKHALNNNNPILHTYDAVFHGFSARLSPSEAKKLQTLPHVTALIPEQVRHVHTTRSPHFLGLQTAAKTGLLRDTDFGSDLVIGVIDTGIWPERQSFNDRDLAPVPAKWKGRCVAAKDFPATSCNRKLIGARFFSAGYEATNGKMNETVEYRSPRDSDGHGTHTASIAAGRYVSPASTLGYAAGVAAGMAPKARLAVYKVCWIGGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDVIAIGAYGAASRGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPAHVKLGNGRVIAGASLYGGPGLIPGRMYPVVYMGSEVSGGGSTGGGDGYSASLCLDGSLDPKLVKGKIVVCDRGISSRAAKGEVVKKSGGIGMILANGIFDGEGLVADCHVLPATAVGAVGGDEIRRYIATVAKSNHSSPPTATIMFKGTRLGVRPAPVVASFSARGPNPVSPEILKPDVIAPGLNILAAWPDRVGPSGVPSDRRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYVVDNRGHAVLDESTGNVSSVFDYGAGHVHPEKAIDPGLVYDISDSDYVNFLCNSNYTTDTIQVITRKIANCSGAKKAGHAGNLNYPSLSAVFQQYGKKKMSTHFIRSVTNVGEANSVYKVTIKPPVGMMVTVEPQTLSFKRVGQKLNFLVRVQTRALKLSPGGSSVKSGSIVWSDGKHTVTSPLVVTMQQPLDY 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2261g00001 807 Pfam Fibronectin type-III domain 695 799 IPR041469 -
Stsc2261g00001 807 FunFam Subtilisin-like protease SBT1.5 153 372 - -
Stsc2261g00001 807 Gene3D - 664 802 - -
Stsc2261g00001 807 Pfam Subtilase family 151 628 IPR000209 GO:0006508|GO:0008236
Stsc2261g00001 807 SUPERFAMILY Protease propeptides/inhibitors 39 125 - -
Stsc2261g00001 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 77 799 IPR045051 -
Stsc2261g00001 807 Gene3D - 359 516 - -
Stsc2261g00001 807 FunFam Subtilisin-like protease SBT1.5 664 802 - -
Stsc2261g00001 807 PRINTS Subtilisin serine protease family (S8) signature 576 592 IPR015500 -
Stsc2261g00001 807 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Stsc2261g00001 807 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Stsc2261g00001 807 CDD Peptidases_S8_3 124 613 IPR034197 -
Stsc2261g00001 807 Pfam Peptidase inhibitor I9 39 126 IPR010259 -
Stsc2261g00001 807 ProSiteProfiles Serine proteases, subtilase domain profile. 130 647 - -
Stsc2261g00001 807 SUPERFAMILY Subtilisin-like 125 651 IPR036852 GO:0004252|GO:0006508
Stsc2261g00001 807 CDD PA_subtilisin_like 366 508 - -
Stsc2261g00001 807 FunFam Subtilisin-like protease SBT1.9 27 126 - -
Stsc2261g00001 807 Pfam PA domain 391 487 IPR003137 -
Stsc2261g00001 807 ProSitePatterns Serine proteases, subtilase family, serine active site. 577 587 IPR023828 -
Stsc2261g00001 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 126 IPR037045 -
Stsc2261g00001 807 Gene3D Peptidase S8/S53 domain 153 660 IPR036852 GO:0004252|GO:0006508
Stsc2261g00001 807 FunFam subtilisin-like protease SBT1.5 359 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2261g00001 Stsc-Chr2261 1798 4555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2261g00001 39 805 Subtilisin-like Serine Gene Family AT3G14240 74.967 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2261g00001 - - gmx:100808511 1268.06