LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc2244g00002	ATGGTACTCCAGAAATCATCACCATCATCTATGGTGTTTAAAGCCAGGAGGAATCCAGCGGAGCTAGTGGTACCTGCGGGGCCCACTCCCCATGAGCTTAAGCTTCTGTCTGATATTGATGACCAACAGGGTCTTCGTTACCAACTTCCATTGGTGCTGTTCTTTCCTTATCAGCCTTCAATGGCAGGGAAAGACCCTGTGCATGTCATCAGAGAAGCATTATCCAAAGCACTTGTGTTCTATTATCCATTAGCCGGGAGGTTTAGGGAAGGTCCTAGGGGCAAACTTATGGTGGATTGCACTGCTGAAGGTGTATTGTTCATCGAAGCTGATGCAGATGTTACACTTGACCACTTTGGTGTTGATCTTCTGCCTCCATTTCCTTGCTCTCATGAGCTCCTCTATCATGTTCCATATTTTGATGATGGAATTATTAACTCTCCACTCCTGCTTATTCAGGTGACACGACTGAAATGCGGCGGGTTTATCTTTGCTGTAAGTGTTAACCATTTAATGTGTGATGCAATTGGAATTGCTCACTTCATAAAGGCCGTTGCAGAAATAGCCCAAGGTGCAGCAAAGCCTTCCATCATGCCAGTGTGGTGTAGGGACCTTCTTTGTGCCAGGGACCCACCAACAGTCACATGCCTCCACCCTGAATACCAACAACAACTACCGCTTCATGACTACAAAA	694	0.4625	MVLQKSSPSSMVFKARRNPAELVVPAGPTPHELKLLSDIDDQQGLRYQLPLVLFFPYQPSMAGKDPVHVIREALSKALVFYYPLAGRFREGPRGKLMVDCTAEGVLFIEADADVTLDHFGVDLLPPFPCSHELLYHVPYFDDGIINSPLLLIQVTRLKCGGFIFAVSVNHLMCDAIGIAHFIKAVAEIAQGAAKPSIMPVWCRDLLCARDPPTVTCLHPEYQQQLPLHDYK	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc2244g00002	231	PANTHER	ACYL TRANSFERASE 4	13	214	-	-
	Stsc2244g00002	231	Pfam	Transferase family	21	223	-	-
	Stsc2244g00002	231	Gene3D	-	11	223	IPR023213	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc2244g00002	Stsc-Chr2244	1689	2561	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc2244g00002	20	222	Monolignol Biosynthesis Gene Families	AT5G48930	39.130	5.38e-29	111

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc2244g00002	K19861		-	aip:107641488	343.969