Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc222g00003 ATGGGATCCGCTCGTATCATCTCAAGTAGCCTAGTCCAAGCACAAGACAAAAATGGCCGTTTCATCATAACCACCAACAACGAATACAAAACCTCCACGTGTCACATCCTCTGTAACAACCAGGGAGCGCTCTTCGTCCATGCTATAGCAGACAACACAACCGTAAAGGACATCCTTCAATCCAACCACGTACCCTCCCTTGTTCGTTCATTCTTCCCACTTAACGGCGTTAAGAACCACGAAGGAACGTTGAAGCCGCTACTGGCAGTGCAAGTAACGGAGTTAGTTGACGGCTTCTTCATCGGCTGCACGCTCAACCACGCCGTTGCAGACGGCAAGTCGTTTTGGCATCTCGTCAATTCTTGGGCCGAAATCTCACGCGGCCGTAACAAACCGTCAAAGCTACCTTCACTTGAACGTGTTTTTTTAAATGGCGTTGAGCCTCCTATACAGTTCCATTTCACGAAAGAATCAGAATTGGAAGAGCAACAACCATCACCGCCTGAGAGGTTCTTCAACTTCACAAAGGAGAAGATATCGCAGCTCAAAGCAAAAGTCAACGATGAAGCAGGCACGGTCAAAATTTCTTCGCTGCAAGTGGTTTTGGCTTATCTTTGGCGCTCTGTGATCCGTTGCATGCGTGATTGTGACCCGCAAGAAGAGGTCTCTTACCTATTTGCGGTGGGTGCTAGGCCGAGGTTGGTTCCGCCGCTTCCGGAGGACTATTTTGGGAATGCAGCTGTGATCGGTGGTGTGACCATGACTGCCGAGAAGCTTCTAGAAGGTGGTAAGTGTGCTTTTGACATGAATAAGATGATTGCTTCCTACACGGATGAGAAAGTGAGGAGTCACTGTGCTTCTTGGGTGAGAGACCCAATATTTTTTAAGCTGCGAAGTGTGGCTAACTACAACTCCTTGGTCACCAGCAGTTCCCCACGTTTTGATGTTTACGGTTGGGGGAAGCCTGTGGGGGTTCGAAGTGGCGGCGCAAACAAGCATAACGGGAAGATTAGCGTGTTTGCTGGGGTTGAAGAAGGTAGCATTGACATTGAAGTGTCCCTTCCATTTGAGATCTTGGAGGCCCTGGAGAATGACCCCGAGTTCATGGATGCCGTTTCCAACTAG 1125 0.4916 MGSARIISSSLVQAQDKNGRFIITTNNEYKTSTCHILCNNQGALFVHAIADNTTVKDILQSNHVPSLVRSFFPLNGVKNHEGTLKPLLAVQVTELVDGFFIGCTLNHAVADGKSFWHLVNSWAEISRGRNKPSKLPSLERVFLNGVEPPIQFHFTKESELEEQQPSPPERFFNFTKEKISQLKAKVNDEAGTVKISSLQVVLAYLWRSVIRCMRDCDPQEEVSYLFAVGARPRLVPPLPEDYFGNAAVIGGVTMTAEKLLEGGKCAFDMNKMIASYTDEKVRSHCASWVRDPIFFKLRSVANYNSLVTSSSPRFDVYGWGKPVGVRSGGANKHNGKISVFAGVEEGSIDIEVSLPFEILEALENDPEFMDAVSN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc222g00003 374 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 19 369 - -
Stsc222g00003 374 Gene3D - 156 364 IPR023213 -
Stsc222g00003 374 Pfam Transferase family 32 369 - -
Stsc222g00003 374 Gene3D - 8 150 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc222g00003 Stsc-Chr222 33512 34825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc222g00003 36 363 Monolignol Biosynthesis Gene Families AT5G48930 27.933 3.28e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc222g00003 - - adu:107480292 599.356