Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2229g00001 ATGGGGTTGGGAGTTCCTGCTCTTCCATTCACCTTAGTGGCTCACCTTCTAGCAGTGGCTGCTATTGTGATGGTCTTGGTTTGGAACATACACTTCAGAGGTGGCTTAGCTTGGGAAGCTGCCAACAAAAATCTCATATTCAATATCCATCCTGTTCTTATGGTAATTGGATTAATAATTATTGGGGGTGAAGCTATCATATCTTACAAAGCTCTACCTCTGAAGAAGGAAATTAGGAAGTTGATACATCTTATTCTCCACGCAATTGCACTAATACTTGGAATAGTTGGAATTTGCGCTGCCTTCAAGAATCATAATGAAAGTGGTATCGCCAATATGTACAGCTTGCATTCATGGCTTGGCATTGGAGTTATTTCCCTTTATGGGATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTTCCCCGGAGGGAGTGCATCACTAAGAAGCCAATCAATTCCATGGCACGTGCTGTTTGGGCTGATAGTGTATGCTCTGGCACTTGGAACAGCTTCTCTTGGGTTCCTAGAGAAGCTCACATTCCTGGAGAGTTCAGCAGGTGTAGCTAAATATGGTTCAGAGGCATTCCTTGTTAACTTC 600 0.4283 MGLGVPALPFTLVAHLLAVAAIVMVLVWNIHFRGGLAWEAANKNLIFNIHPVLMVIGLIIIGGEAIISYKALPLKKEIRKLIHLILHAIALILGIVGICAAFKNHNESGIANMYSLHSWLGIGVISLYGIQWIFGFVMFFFPGGSASLRSQSIPWHVLFGLIVYALALGTASLGFLEKLTFLESSAGVAKYGSEAFLVNF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2229g00001 200 CDD Cyt_b561_ACYB-1_like 40 183 - -
Stsc2229g00001 200 Gene3D - 4 200 - -
Stsc2229g00001 200 FunFam Cytochrome b reductase 1 5 200 - -
Stsc2229g00001 200 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Stsc2229g00001 200 ProSiteProfiles Cytochrome b561 domain profile. 13 200 IPR006593 -
Stsc2229g00001 200 PANTHER CYTOCHROME B561-RELATED 4 200 IPR043205 GO:0016491
Stsc2229g00001 200 SMART 561_7 49 175 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2229g00001 Stsc-Chr2229 1825 4374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2229g00001 1 200 Chloroplast and Mitochondria Gene Families AT4G25570 71.000 4.99e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2229g00001 K08360 - qsa:O6P43_004312 291.197