Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2228g00001 ATGGGTTATTACTACACGTTGTTGTTGAACACTTGTTTTCTTGTAGTGCTTTCTGGTTTCATGATTGTTCATATACAACATCTTCCAGAAGTTGTTGATATGAACAACAACAACAAATCATTCTCTAATAATAACATAACCACCGATCTAGATTGCAATAGTTTACACAACCATGGCAGCTACAAAGACAAGTGTTTGTACCTGAAATCCAACGACCCATGCGTGTCTCAGGGCTACATAGATTACCTTAACCTCTTCTACTGCAAATTTGGGAGCTTCCCTCTTTTGGGTTACACTCTTTTGTTTCTTTGGCTTCTTGTTCTGTTCTATGTGTTGGCAAACACAACATCTCAGTACTTTTGTCCTTCACTTGAAACCCTCTCAAAGTTTCTGAGACTATCACCAACAATTGCTGGGGTGACTCTTCTCTCCCTTGGCAATGGTGCCAGTGATGTCTTCTCAAGCCTTGTCTCTTTCCAAGGGAGTGGGACCCAGAGCATTGGCTTCAACACTGTTCTTGGTGGGGTTTTGTTCGTAACTTGTGTTGTTGTGGGGTTAGTTAGTATCTCGATACGTAACAAAAGTGTTGGGGTTATGAAATCTGCGTTTGTTAGAGATGTGTGCTTTCTCCTCCTTGTTCTTTTGTTCTTGTTCAGCATCTTCATCAGTGGAGAAATCAACCTTCTTGGTGCAGTTGGTTTTACTCTTCTTTACGTGCTGTATGTGATTCTTGTTTACGTGTCTTCCAAGAAATGGAAGGTTGGTGATGATAATGATGATGGTGATGATTTGAATGGGCCACTTCTCAGTTCAATTGAAAAAGGGTTAATTGATAATAATCCTGAAAATGAAGAAAATAGTGAGGTGAAGAAAAGAGAAAGATTCTGGTGGAGAAATTACCTTTATGTCCTTGAGATGCCACTTTACTTGCCAAGGAGGTTGACTATTCCGGTTGTTTGTGAAGAGAATTGGTCAAAGCCTTTTGCTGTAGCTTCAGTGACACTAGCACCAATTCTATTATGCATAATTTGGACCCCTTTCAACCAAGAAAATTTTATTAGCACCTTTGTTGTTTATGGAATTGGTTTGTTTGTTGGGATTGTGCTTGGAATTGCAGCAATTCTAACTACAGAGATGTGGGCGCCGCCGCGGAAGTGGTTGTTTCCGTGGCTTGCTGGAGGGTTTCTGATGAGTGTGACTTGGAGTTACATTTCAGCTCAAGAATTGGTAGGGTTGCTGGTTTCAATTGGATACATTTTTGGGATTAGTCCTTCAATTCTAGGGCTAACTGTTCTTGCTTGGGGTAATTCACTTGGAGATTTAATGACCAATTTGACCCTGGCTATAAATGGTGGATCTGAGGGTGCTCAAATTGCAATTTCAGGTTGCTATGCTGGACCCATATTCAATACTCTAGTTGGATTGGGTTTGTCTCTTGTTACTTGCACTTGGTCACAGTACCCAGAAAATGTTGTGATTTCTAAAGATCCATATCTATGGGAGACAATGGCCTTTCTGGTTATTGGATTGATTTGGGCACTGTTTGTTTTGATTAGAAAAGATATGAAGCTTAATGGACTCTTGGGATGGGGGCTTTTGGTAATTTACTTCGTTTCTCTGTTTCTCAGGCTGATTCAGACACAAGGGTCTCTACCACTTTATAATTAA 1668 0.4035 MGYYYTLLLNTCFLVVLSGFMIVHIQHLPEVVDMNNNNKSFSNNNITTDLDCNSLHNHGSYKDKCLYLKSNDPCVSQGYIDYLNLFYCKFGSFPLLGYTLLFLWLLVLFYVLANTTSQYFCPSLETLSKFLRLSPTIAGVTLLSLGNGASDVFSSLVSFQGSGTQSIGFNTVLGGVLFVTCVVVGLVSISIRNKSVGVMKSAFVRDVCFLLLVLLFLFSIFISGEINLLGAVGFTLLYVLYVILVYVSSKKWKVGDDNDDGDDLNGPLLSSIEKGLIDNNPENEENSEVKKRERFWWRNYLYVLEMPLYLPRRLTIPVVCEENWSKPFAVASVTLAPILLCIIWTPFNQENFISTFVVYGIGLFVGIVLGIAAILTTEMWAPPRKWLFPWLAGGFLMSVTWSYISAQELVGLLVSIGYIFGISPSILGLTVLAWGNSLGDLMTNLTLAINGGSEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSQYPENVVISKDPYLWETMAFLVIGLIWALFVLIRKDMKLNGLLGWGLLVIYFVSLFLRLIQTQGSLPLYN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2228g00001 555 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 285 550 - -
Stsc2228g00001 555 Gene3D - 326 544 IPR044880 -
Stsc2228g00001 555 Gene3D - 133 257 IPR044880 -
Stsc2228g00001 555 Pfam Sodium/calcium exchanger protein 391 543 IPR004837 GO:0016020|GO:0055085
Stsc2228g00001 555 Pfam Sodium/calcium exchanger protein 102 246 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2228g00001 Stsc-Chr2228 3647 5314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2228g00001 48 550 Antiporters AT5G17850 54.143 2.17e-175 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2228g00001 K13754 - gmx:100813848 674.47