Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc221g00010 ATGAGTGCGGCTATTGACAATATTCTTAAAGACGTCACACGAATACTTCCTCCCTTGCCTCTGTATATTGGCCGTCCACTTGGACTTGATTCTGAGCTTAAAGAGGCGACATCACTTCTAGAGATCGAATCTCATGCTAGCTGCTGTTTCATGCTGGGAATTCATGGAGACGGTGATGTAATAAGAAAATTTGCTGCGGAGCTGTATAACGAGATTAGGCCTCACTTTGTAGCTGCAAGTTTTCTTTCTAATATAAGTGAGAAAACTAATGAAAGTGGTGGTGGCCTAGAAGATCTACAAGAAAAGCTTCTTTCTGAGATGGGATCCGAGGTAAAGGCAAAGATTGGAAGCACAGAAAAAGGGTCTGCTGAAATAAAACGAGGACTGGGCAACAAAAGGGTTCTTCTGGTTTTGGACGATGTTGATAGCATAGAGCAATTGAATTCACTAGCAGGAGGAACTGATTGGTTTGGTTTGGGTAGTAGGATCATTATAACAACAAGAAATGAACATAAATATAGCATCTCCGAAGGAAGTAGTTCTGCTGTGAAGGAAGAAAATGTAGTGGGATTGGAGAAAGACTTCAATATGGTAATTAATCTACTCAAGGAAGAAAATTCTCCAGGGAATGTGGTTTCTATTGTTGGCATGGGTGGGTTGGGCAAGACTACCCTTGCTCAAAAGGTCTACAATAGCATTGAGGCCAGACAGTTATTTCCTCGTCGTGCATGGGCAACCATTTCCCAAAGGCCTGTGTTGATCCAAGTTTTGAGAAACCTTCTCAAGTGTTTGAAACCCAAATCTACATATGAAAATGCAAGTGAAGAGGAGTTGAAGGAGAACGTAAGAGCATGCTTGAATGGGAAAAAGTATTTGATAGTCCTTGACGACGTTTGGGACACTAATAACCCATGGGGTGCTCTAAGGGGTTGTTTCCCAAGAAACAAGAATGGCAGCATGATACTAGTAACTACCCGCGATCATCGAGTGGCCAACGCTTTAGAGTCAAAGAATCCTCATCTCACAGTTTCCTTGATGAATGAAGAAGAAAGTTGGGAACTGTTTCACAATGAGGTGTTCTACAACACAATATGTCCTCCGGAACTAGAAGCTATTGGTAGATCAATTGCTAAAACTTGTAACGGTTACCATTGGTCATCAAAACCACAGCCGGGATTGTCGCAAAGAGGAAGAAATTAA 1200 0.4183 MSAAIDNILKDVTRILPPLPLYIGRPLGLDSELKEATSLLEIESHASCCFMLGIHGDGDVIRKFAAELYNEIRPHFVAASFLSNISEKTNESGGGLEDLQEKLLSEMGSEVKAKIGSTEKGSAEIKRGLGNKRVLLVLDDVDSIEQLNSLAGGTDWFGLGSRIIITTRNEHKYSISEGSSSAVKEENVVGLEKDFNMVINLLKEENSPGNVVSIVGMGGLGKTTLAQKVYNSIEARQLFPRRAWATISQRPVLIQVLRNLLKCLKPKSTYENASEEELKENVRACLNGKKYLIVLDDVWDTNNPWGALRGCFPRNKNGSMILVTTRDHRVANALESKNPHLTVSLMNEEESWELFHNEVFYNTICPPELEAIGRSIAKTCNGYHWSSKPQPGLSQRGRN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc221g00010 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 382 IPR027417 -
Stsc221g00010 399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 187 382 IPR044974 GO:0006952
Stsc221g00010 399 Pfam NB-ARC domain 192 382 IPR002182 GO:0043531
Stsc221g00010 399 Pfam NB-ARC domain 97 171 IPR002182 GO:0043531
Stsc221g00010 399 Gene3D - 180 344 IPR027417 -
Stsc221g00010 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 175 IPR027417 -
Stsc221g00010 399 Gene3D - 16 179 IPR027417 -
Stsc221g00010 399 PRINTS Disease resistance protein signature 211 226 - -
Stsc221g00010 399 PRINTS Disease resistance protein signature 285 299 - -
Stsc221g00010 399 FunFam Probable disease resistance protein At1g61300 170 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc221g00010 Stsc-Chr221 30883 32129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc221g00010 2 177 WRKY Transcription Factor Family AT4G12020 26.554 4.61e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc221g00010 - - aip:107637432 518.464