Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc221131g00001 ATGTCAGGGGTGGCTACTTTGTTTGACTACACAAAGAAAGATCAAACTGTTAACTATGAAGATTGGATTACTCAATTCTTGAACACGGATGAGGTGAAGAAGGTACTGGGAGTGAACGAATCTCAGGTGTTTAAAGCTACCAGCAGTGAGGTAAGGACAGCGTTGCAGGGTGATATAATGAAGAGTGTCAAGTTTAGGGTAGAGGAGTTGTTGAGGATCAACACTACTAGGGTGTTGATATACCAAGGTCAATATGATTTGCTTGCTGGTCCAGTGCAAACTGATGCGTGGGTGAAGACTATGAAATGGGAAGGGATTGAGGAGTATATGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACCAAT 405 0.4321 MSGVATLFDYTKKDQTVNYEDWITQFLNTDEVKKVLGVNESQVFKATSSEVRTALQGDIMKSVKFRVEELLRINTTRVLIYQGQYDLLAGPVQTDAWVKTMKWEGIEEYMNAERKIWKVNGELAGYVQQWKSLTN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc221131g00001 135 Pfam Serine carboxypeptidase 14 134 IPR001563 GO:0004185|GO:0006508
Stsc221131g00001 135 Gene3D alpha/beta hydrolase 4 135 IPR029058 -
Stsc221131g00001 135 SUPERFAMILY alpha/beta-Hydrolases 16 134 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc221131g00001 Stsc-Chr221131 4 557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc221131g00001 28 126 Calmodulin-binding Proteins AT2G22960 24.242 1.04e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc221131g00001 K09645 - gmx:100781899 167.933