Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2210g00001 ATGGAGTCAATCGGCAGAAATAATGGGGAAGTAGTGGCGGTGATTATGTTTGTTTTAGTTTTTTTAGTTTGTTATAGCGACGGAAGTGTAATCGTTGCAAAAGATGGGAGTGGAGATTACACAAGTGTGAGTGAAGCAATGAAGAATGCTCCAAGGTTGAGTGAGAGTGTTTACACCATTCATGTTCGAGAAGGTACTTATGAAGAGTATGTTATCATTCATCATGACAAGACCAATATCAAGCTTGTTGGAGATGGTCCTCGCCATACCAAAATTGTTGGTTACCAAGGTTCCACCATAGATATTCATGGAGAAGGGTTCATAGCGGAAAGCATAGCATTTGAGAACTCAGCAGGTCTAAAAGCAAGCGCTGCAGTTGCCGTTCGCAACGAAGCAAACAACACCATCTTCTACCGATGCTCCATCGAGGGTTACCAGGACACCTTATGGGCGGTTTCCGGCAGACAGTTCTACAAGAACTGCGACATCTACGGCACCGTCGACTTCATCTACGGCGCCGCCGCCGCCCTCTTCCAAGACTGCATGGTATACGCAAGATACCGCGAATACGTAACCTTCACCGCCCAGTCACGTGACAATCCAAACGACAACTCCGCCTTCACTTTCCAGCGTTGCAACTTCACCATGTCTCCAGAAGATTCCAGTTCCCATGCTAACTCTGAGGTGCACGCAACGTTGGGCCGCCCGTGGAGGCCGTACTCGACGGTGGCTATACTGCAGTGTTTTATTGACTCTATTGTGGAGCCCGCGGGCTGGGAAGCGATGCCGGGACAGCCCACTGATAAGGTTACTTATGTGGAGTATGGGAACGTTGGGCCTGGGGCCCGTACCGAGGGGAGAGTGAAGTGGCCTGGTGTTAGAGTCCTTCGCCGACCTGCCGAAGCTGCACGCTTCACCGCTTCGCATCTCTTGGATGCTGATTCTTGGATTCCCTCCACTGGTGTTCCTTATGACAATGGATTCTAG 987 0.5005 MESIGRNNGEVVAVIMFVLVFLVCYSDGSVIVAKDGSGDYTSVSEAMKNAPRLSESVYTIHVREGTYEEYVIIHHDKTNIKLVGDGPRHTKIVGYQGSTIDIHGEGFIAESIAFENSAGLKASAAVAVRNEANNTIFYRCSIEGYQDTLWAVSGRQFYKNCDIYGTVDFIYGAAAALFQDCMVYARYREYVTFTAQSRDNPNDNSAFTFQRCNFTMSPEDSSSHANSEVHATLGRPWRPYSTVAILQCFIDSIVEPAGWEAMPGQPTDKVTYVEYGNVGPGARTEGRVKWPGVRVLRRPAEAARFTASHLLDADSWIPSTGVPYDNGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2210g00001 328 Gene3D - 28 328 IPR012334 -
Stsc2210g00001 328 Pfam Pectinesterase 30 313 IPR000070 GO:0030599|GO:0042545
Stsc2210g00001 328 FunFam Pectinesterase 4 26 328 - -
Stsc2210g00001 328 PANTHER PECTINESTERASE 30 318 - -
Stsc2210g00001 328 SUPERFAMILY Pectin lyase-like 26 326 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2210g00001 Stsc-Chr2210 2609 6703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2210g00001 30 328 Carbohydrate Esterase AT1G11590 41.853 3.73e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2210g00001 K01051 - gmx:102665195 436.417