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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc21g00019
ATGGGAGGGGCAACACTGCCACCTGGATTTCGTTTTCACCCAACAGATGAAGAATTATTGGGATATTACCTAAAAAGAAAAGTGGAAGGCCTTGAAATTGAGCTTGAGGTTATCCCTGTCATTGATTTTTACAAGTTTGATCCTTGGGAGTTGCCTGAGAAATCATTTTTGGCAAACAGAGACAGAGAATGGTTCTTCTATTGTCCAAGGGACAGGAAGTACCCAAATGGATCAAGAACAAACAGAGCCACCAAATGTGGTTATTGGAAAGCCACTGGAAAAGACAAGAAAATTGTGTGCCAATTTGATACTCCTTCCACTGTCACTGGATATAGAAAGACCCTGGTTTTCTACCGTGGCAGAGCCACTTTGGGTGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCGCCGACGATCTCGGCGTACCGTCTTCATGTTTTCAGGGTGGTTATGCCTTGTGCCGGGTTTTTAAGAAGAACGAAAAGGTGAATGATTTGCAAGGGATCAATGGGAACGATGAGTCAATGAGAATCTCAAATGAGCCCTTAACCATTTCTGCTGATGCTTCATCCTCTCAAGCAATCCATTTGAACAGTGAGAGTGTTTATTCAAGCCCCATTGCTTCTCCACACAATGTGGTTCCAATGGCAGACTCTAACCAACCTTCTATAAACACCAATTCTTCAGCAGAACTTTGGGTGTCCCCTGATCTGATTCTTGATTCTTCAAAGGACTATCCTCAAGTACAAAATAGTTTTACAAGGTGTGACATACCAAGTAGTACAATGACACCATGGGAGTCATTGGATCAAACAGAAATTTCCACTAGTTCATCGTACTCAAATTTTAATCGGCAAATCGAATTTTCCGAAGATTTTAACATGATTGACGACATGTCACATTACTCGATGCAGGAAGATTTTACGTACTTTTATGAAAATGGAAGTTATGATCATATTAATTCAGTTGAATATCCAGAATACTTTTAG
993
0.4079
MGGATLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLANRDREWFFYCPRDRKYPNGSRTNRATKCGYWKATGKDKKIVCQFDTPSTVTGYRKTLVFYRGRATLGDRTDWVMHEYRLADDLGVPSSCFQGGYALCRVFKKNEKVNDLQGINGNDESMRISNEPLTISADASSSQAIHLNSESVYSSPIASPHNVVPMADSNQPSINTNSSAELWVSPDLILDSSKDYPQVQNSFTRCDIPSSTMTPWESLDQTEISTSSSYSNFNRQIEFSEDFNMIDDMSHYSMQEDFTYFYENGSYDHINSVEYPEYF
330
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc21g00019
330
Pfam
No apical meristem (NAM) protein
7
137
IPR003441
GO:0003677|GO:0006355
Stsc21g00019
330
SUPERFAMILY
NAC domain
4
160
IPR036093
GO:0003677|GO:0006355
Stsc21g00019
330
PANTHER
PROTEIN CUP-SHAPED COTYLEDON 2-RELATED
5
244
-
-
Stsc21g00019
330
FunFam
Nac domain-containing protein 86
15
163
-
-
Stsc21g00019
330
Gene3D
NAC domain
15
165
IPR036093
GO:0003677|GO:0006355
Stsc21g00019
330
ProSiteProfiles
NAC domain profile.
6
160
IPR003441
GO:0003677|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc21g00019
Stsc-Chr21
140382
142863
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc21g00019
1
322
NAC Transcription Factor Family
AT4G17980
50.915
1.26e-101
299
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NAC
Stsc21g00019
NAM
9.3e-38
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc21g00019
-
-
aip:107605232
499.59
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