Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc21g00009 | ATGGGTTGCACGGTGAGGGAAAAGCACATCAGAGCGAATCGGAGACCCCGATCATCATCGAAACCCGATTCTGATTCGTGCGACAGAGACCCGATTTCCAAATCCATAGCTGAGTCTGGCCTCAAGCCCTTCAAGTATCACCACCATGTGGCTCCCAACAACAGCAAAAACGACCCTTCTTCTACCCAGAACACGAACCCTAACTCCGATGAAACGGGTTGGGGTTACTGCACCGAGGAACAGTTGGAGGAGATCCTCTTGAAGAACCTCGAGTTTATTTATAACGAAGCGGTCTCCAAGCTCGTGGCTTTGGGTTACGATGAGGACGTTGCGGTCAGAGCTATTTTGAAGAACGGCCATTGCTACGGTGGAATGGATGTTCTCACCAACATACTGCATAATTCGTTAGCCTTCTTGAATAGTAATATCAACAACAACAATAATAATAATGGTGGTTCTGGAAATGGTGGATGTTTGAATGAGAGTGAGGCTGCTTTCTCTGATTTGAGGCATCTGGAGGAGTATTCTCTTGCTGGTATGGTGTGTTTGTTGCAACAGGTGAGGCCTCATTTGAGCAAAGGTGATGCAATGTGGTGTTTGCTGATGAGTGATCTTCATGTTGGTAGGGCCAGTACTATGGAGATTCCAGTCCCGGGAAGTGGGTACCCGTGTACCGCGACTGTGGCTGCTGCTGTTGAGGGTGGTGGCAATTCGGTAGTAGGTGATGATGGTGGCAATTCGGCGGTTGGTGGTGGTGGTGGTGGGGGTGTTATGGCTCCTGCATTGTGTAGGTTTCATGGTGGTTGGGGATTTGGGAATGGGGCAGGCTCAGGGTTTCAGGCGAATGGGTTGTTCTCTTATGGTGCTGCTGAGATGAATTTGCAGCTGCAAAGGGATATTGAGTTCCCTAAGAGGTTTAACCTTTCGCCTTCGATGAAGTCGTTGTTGAAGAGGAATGTGGCTGCGTTTGCTGCTGGTTTTAGGGCAAATTCAAAGCAATTGCAGACTCAGACTCAGGCTCAGTTGAAGGCCTTTTCCGGTAGTGGTGCTGTGTCAAAGTTGGATTCTCCGGAAGCACTGGTTGAGCAGCCTGGACGGGCTGGAGAGTCTCAGAATGTTGATAGCCAAGATGCTGTGAACTCGGTGCTGAGTAAGTTCCGTGATCTAAATCTTGATGAGAATTTGGAGCTTGTGGCAGAGGATCAGAAGGATGAGGTGATAGTCACTTTGTTTCATCAGATCAAGGATCTTGAGAAACAGGTTAAGGAGCGAAAAGATTGGGCTCATCAGAAGGCAATGCAAGCTGCGAGAAAGCTAAGCAGTGATCTTACTGAGCTCAAGATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGAAAACAGGCACTCGAGGACACCACCATGAAGAGGCTCTCAGAGATGGAGAATGCTTTGAGAAAGGCTAGTGGTCAAGTGGACCGTGCGAATGCGGCCGTGAGGAGACTAGAGACAGAGAATGCGGAAATCAAAGCAGAGATGGAGGCTTCCAAGTTAAGTGCATCAGAGTCGGTGACAGCTTGCTTAGAGGAGATTGCTGATGAAAAAGCAAAGATATCGGAGACACAAGAAGTATTGGCTCAGATTAGACAGAGCCAAAAAGATGCCGAGGTTAAGTGGAAGGAAGAGGTGAAAGCCAAAGAGGAAGCCTTAGCGCTAATCGAAGAGGAGCGCCATTCTAAGGAAGCAGCTGAATCCAACAATAAAAGGAAGCTCGAGGCATTACGCCTGAAGATTGAGATAGATTTCCAGCGCCACAAGGACGATCTACTCCGACTTGAGCAAGAGCTCTCACGGCTTAAGGCGTCTGCACAGTCCGCTGAGCTGCATCATCAGTCAAATGCTGCTTCACCTGTTGGTGGCGAGTCTGAGGGCACAATGCCCCAGAGAGATACAATTGCCAAGCTACTCCAAGAACTAGATAATCTAGAGGATTATTCGGAGAAGGAAGTGAATGGCAACAGAGAATGCATTATATGCATGAAAGATGAAGTTTCCATTGTTTTCTTGCCGTGTGCGCACCAAGTTATGTGTGCTGGTTGTGGCGATGAGTATGGAAGAAAGGGAAAAGCTGCTTGTCCTTGCTGCAGGGTTCCGATCCAACAGCGAATCCGTGTGTTTGGCGCAAGCTCATAG | 2181 | 0.4842 | MGCTVREKHIRANRRPRSSSKPDSDSCDRDPISKSIAESGLKPFKYHHHVAPNNSKNDPSSTQNTNPNSDETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDEDVAVRAILKNGHCYGGMDVLTNILHNSLAFLNSNINNNNNNNGGSGNGGCLNESEAAFSDLRHLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASTMEIPVPGSGYPCTATVAAAVEGGGNSVVGDDGGNSAVGGGGGGGVMAPALCRFHGGWGFGNGAGSGFQANGLFSYGAAEMNLQLQRDIEFPKRFNLSPSMKSLLKRNVAAFAAGFRANSKQLQTQTQAQLKAFSGSGAVSKLDSPEALVEQPGRAGESQNVDSQDAVNSVLSKFRDLNLDENLELVAEDQKDEVIVTLFHQIKDLEKQVKERKDWAHQKAMQAARKLSSDLTELKMLRMEREETQRLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVTACLEEIADEKAKISETQEVLAQIRQSQKDAEVKWKEEVKAKEEALALIEEERHSKEAAESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHHQSNAASPVGGESEGTMPQRDTIAKLLQELDNLEDYSEKEVNGNRECIICMKDEVSIVFLPCAHQVMCAGCGDEYGRKGKAACPCCRVPIQQRIRVFGASS | 726 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 619 | 642 | - | - | |
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
Stsc21g00009 | 726 | Coils | Coil | 552 | 589 | - | - | |
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 619 | 635 | - | - | |
Stsc21g00009 | 726 | PANTHER | OS05G0141500 PROTEIN | 1 | 525 | IPR046934 | - | |
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 47 | 74 | - | - | |
Stsc21g00009 | 726 | Pfam | Zinc finger, C3HC4 type (RING finger) | 669 | 717 | - | - | |
Stsc21g00009 | 726 | CDD | RING-HC_MIP1-like | 670 | 721 | - | - | |
Stsc21g00009 | 726 | SUPERFAMILY | RING/U-box | 653 | 718 | - | - | |
Stsc21g00009 | 726 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 656 | 723 | IPR013083 | - | |
Stsc21g00009 | 726 | Coils | Coil | 598 | 625 | - | - | |
Stsc21g00009 | 726 | Pfam | Family of unknown function (DUF6592) | 89 | 211 | IPR046527 | - | |
Stsc21g00009 | 726 | Coils | Coil | 527 | 547 | - | - | |
Stsc21g00009 | 726 | MobiDBLite | consensus disorder prediction | 16 | 32 | - | - | |
Stsc21g00009 | 726 | Coils | Coil | 474 | 515 | - | - | |
Stsc21g00009 | 726 | ProSiteProfiles | Zinc finger RING-type profile. | 672 | 712 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc21g00009 | Stsc-Chr21 | 55143 | 60574 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc21g00009 | 652 | 722 | C3H Transcription Factor Family | AT1G73950 | 33.333 | 3.50e-07 | 51.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc21g00009 | - | - | adu:107483267 | 1206.05 |