Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc219g00009 ATGACGCAACGCGGAGTTGGGCGCAACAATTTCATACGCTCTGGGGATATTACTAGGATGATCAAGACTCTCCACGTTATTGGCGCCTTAGGGTTACAACAGAGGGAGAGAGAGTGCTCGTTCCACATCGAAGATCAAACCTGCTTCAGAAGAAACCACAAGAAGCTCGGGCATGTGAGCGCCGGTCACGGTATATTGGAAAAGCACCGCAAGCGCCCCGGAGGCCGCGGTAACGCCGGTGGCATGCACCACCTTCGAATCCTGTTCGAAAGGAAGTACAATCTCGATTACTTCGATAAGACTCCTCATATGCTTGTACCCTGTGACGTTGGGCTTAGCATGGCTCCACTAGAAGTACTTGTTCCATTCATTAGAGAGGCCAGATTTGGTAACACATTGGAGATGCAATCTATAGTATATGATGCTTCCCAGTTGTTTGCGTTTGTTAAGAGGTGGAGGCTTGAGATCAATACCTTCCACCTCCCGTTGGGGATTTCCAACGCTGGTATGGTTGGGGCACATGGCAGTTGGTGGAAGATGTTCTTGGTGCTAGGCCCTCGCCAGCTCCTGCAGACTAACAATATTGCGTCTTTGAGATGGGTGCCACTGCTCGAAGATTTTGACAAGTGCAGTAGGTTTTCATGGGGCTCTGTGGTCTTATGCTCGACATATCATGCTCTTTCCTATGCGAGCAATCGAGCTACTAGGGAGATCAGTGGTTTTCTACCCCTCGTGTACTCCTGGATATATCAGAGATTCCCTAGGTGGTGTCCCTATGGACGAGAATGCATTATTTTCCCTCTCGTTGTCAGGTTGTGTAGTTTAGGCCTGACGTCGAGGGACCACCATGTTGCCAGGATTTTGCGGCTGTGA 873 0.4983 MTQRGVGRNNFIRSGDITRMIKTLHVIGALGLQQRERECSFHIEDQTCFRRNHKKLGHVSAGHGILEKHRKRPGGRGNAGGMHHLRILFERKYNLDYFDKTPHMLVPCDVGLSMAPLEVLVPFIREARFGNTLEMQSIVYDASQLFAFVKRWRLEINTFHLPLGISNAGMVGAHGSWWKMFLVLGPRQLLQTNNIASLRWVPLLEDFDKCSRFSWGSVVLCSTYHALSYASNRATREISGFLPLVYSWIYQRFPRWCPYGRECIIFPLVVRLCSLGLTSRDHHVARILRL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc219g00009 290 Pfam Plant mobile domain 193 258 IPR019557 -
Stsc219g00009 290 PANTHER 60S RIBOSOMAL PROTEIN L27A 47 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc219g00009 Stsc-Chr219 50404 52819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc219g00009 47 101 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 69.091 2.97e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc219g00009 K02900 - aip:107615094 123.635