Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc219g00008 ATGGGAGGAGGTGGCACAGAAGCTTTTCCAGATTTGGGGAAACACTGCCAGCAACAAGGTTGCAACCAACTTGATTTTCTCCCTTTCACCTGTGAAGGCTGCAAACAGGTATTCTGTTTGGAACACAGAACCTACAAGTCCCATTCTTGCCCCAACTCCGACCACAACAGCAGAAAAGTCATCATTTGCGAAATATGTTCGATGTCCATTGAGATCACAGGGCATGTAGGACAGGACGAAGAAGCCATCTTGAAGAAGCACCAAAACTCAGGAACCTGTGACCCCAAAAACAAGAAGAAACCAGTTTGCCCAGTAAAGCGTTGCAAGGAGGTTCTAACCTTCTCAAATTCAAGTACATGCAAAACTTGCCACGTTAAAGTGTGCCTCAAGCACCGTTTCCCCGCCGATCATGCTTGTGGCAGAGCAGTATCGGCTCCGGTGTCAGTTTCTCCTTCGACTCCTGCTTCTGCTAGTGGATGGTGGAATAACAAGTTCTTGGCTGCTTTCGCTTTGAGGAACGGACAAGATTGTGCCAAGAGTGGGGGAAGCAGTTCAGCTTCAACTCCTAGTAACCCTTCTGTTAAGGCATACTGA 594 0.4781 MGGGGTEAFPDLGKHCQQQGCNQLDFLPFTCEGCKQVFCLEHRTYKSHSCPNSDHNSRKVIICEICSMSIEITGHVGQDEEAILKKHQNSGTCDPKNKKKPVCPVKRCKEVLTFSNSSTCKTCHVKVCLKHRFPADHACGRAVSAPVSVSPSTPASASGWWNNKFLAAFALRNGQDCAKSGGSSSASTPSNPSVKAY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc219g00008 197 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Stsc219g00008 197 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Stsc219g00008 197 MobiDBLite consensus disorder prediction 176 197 - -
Stsc219g00008 197 FunFam AN1-type zinc finger protein 2B isoform X1 6 67 - -
Stsc219g00008 197 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Stsc219g00008 197 MobiDBLite consensus disorder prediction 177 197 - -
Stsc219g00008 197 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Stsc219g00008 197 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Stsc219g00008 197 Gene3D - 2 67 IPR035896 -
Stsc219g00008 197 Gene3D - 78 155 IPR035896 -
Stsc219g00008 197 SUPERFAMILY AN1-like Zinc finger 94 143 IPR035896 -
Stsc219g00008 197 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Stsc219g00008 197 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 193 - -
Stsc219g00008 197 SUPERFAMILY AN1-like Zinc finger 9 57 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc219g00008 Stsc-Chr219 42962 44267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc219g00008 1 177 C2H2 Transcription Factor Family AT3G28210 59.322 1.70e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc219g00008 - - gmx:100500384 303.523