Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc219815g00001 ATGAAAGAACTCATCAAAGCTGCATTCAACTACACAACAATTGAATTATCCAGCCACATTCAAAACTCATCTCTTTACAAAGAGTTAGGGAAGGACAACATGACGAGACAAGCTTTAGACATATGCAAGGAAGTTCTTGGTTTGGGTTGCTGGCACCATAACCCACCAACAATCATGGAAAACGTGCTCAAAACTTCTCTAGAGCTTAGTAGCAATGCTTTGGACATGATCAATGGTGTGAGCAAGGTCCTCAGGCAATTCGACTTTAGCGCGCTAGCAGGGGGCGGTGGCGGCGGCGGCAATACTCACAAGAGGCTTCTGGAAGAAGAATCGTCCAATTTATTAAAAGATGGGATGCCTTCTTGGGTGAATGAAGGGCAAAGGAAGCTGATCGAGGCGGGTCCGGTGGGCGGAGTCGGAAGCATTGTGCCTAATTCAGTTGTGGCTAAGGATGGGAGTGGACAGTTTAAGACATTGACGGATGCTCTTAAATTGGTGCCAAAGAAGAACAAGACTCC 518 0.4653 MKELIKAAFNYTTIELSSHIQNSSLYKELGKDNMTRQALDICKEVLGLGCWHHNPPTIMENVLKTSLELSSNALDMINGVSKVLRQFDFSALAGGGGGGGNTHKRLLEEESSNLLKDGMPSWVNEGQRKLIEAGPVGGVGSIVPNSVVAKDGSGQFKTLTDALKLVPKKNKTP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc219815g00001 173 PANTHER PECTINESTERASE 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc219815g00001 Stsc-Chr219815 124 730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc219815g00001 3 172 Carbohydrate Esterase AT3G05610 30.233 6.42e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc219815g00001 K01051 - gmx:100784682 146.747