Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc218783g00001 ATGTCAGGGAGGATTCCATCAACCTCACTAGTTAAAAAATCTGATATGTTTGTTGGCAGGGACAGAGAGAGGGACACCATAGTGAAATTGTTGTTAGATGATACCAACGATGGTGAATTGTCTGTGATTCCCATCGTCGGCATGGGGGGGATAGGGAAAACTACTTTGGCAAAGTTGATTTATAATGATGTCAAAGTGAAGGAAAAGTTTCATGTTAAAGCATGGGTTTGTGTTGGTGAGGATGAGTTTGATGTTCTTAAGATGACAAAGGCTGTGATAGAGAAAACTGGTAGTTCTTGTCACTCAAATGATTTAGATACAGTTCAAAATTATTTGATGGATAAGCTAGCCGGGAAGAAATTCTTGGTTGTTATAGATGATGTATGGAGTAGTAATCGTGAGGGTTGGGAAAGTTTTCTAACTCCTTTTGAGTGTGGATGTGAGGGAGGTCATGTTCTTGTAACAACTCGTCTTGATCCGGTTGCTTCTATGGTGAAAACTAATCATAATCAACCTCTCAAGTTGAGTTTGTTGGAGGAGGAAGATTGTTGGTCAGTGTTTGTAAAACATGCATTTTTTTCTACCGAATCTAGAGACCGTTCAGCTTTAGAAATTGTTGGTAGAAAAATAGTCGAGAAGTGTAAAGGCTTACCTTTGGCTGTTCAGACACTCGGGAGCTTACTAAGAACAAAAGATCACGAGAGTGATTGGATTGATGTTTTGAATAGCGAAATTTGGGAGTTTTCTGAAGATGAGAGTAAGATTCTTCCTGCCTTAAGAATTAGCTATCTTTACCTCCCTTC 803 0.391 MSGRIPSTSLVKKSDMFVGRDRERDTIVKLLLDDTNDGELSVIPIVGMGGIGKTTLAKLIYNDVKVKEKFHVKAWVCVGEDEFDVLKMTKAVIEKTGSSCHSNDLDTVQNYLMDKLAGKKFLVVIDDVWSSNREGWESFLTPFECGCEGGHVLVTTRLDPVASMVKTNHNQPLKLSLLEEEDCWSVFVKHAFFSTESRDRSALEIVGRKIVEKCKGLPLAVQTLGSLLRTKDHESDWIDVLNSEIWEFSEDESKILPALRISYLYLPS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc218783g00001 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 267 IPR027417 -
Stsc218783g00001 268 PANTHER DISEASE RESISTANCE PROTEIN RP 20 268 IPR044974 GO:0006952
Stsc218783g00001 268 Gene3D - 177 266 IPR042197 -
Stsc218783g00001 268 PRINTS Disease resistance protein signature 115 129 - -
Stsc218783g00001 268 PRINTS Disease resistance protein signature 42 57 - -
Stsc218783g00001 268 PRINTS Disease resistance protein signature 214 228 - -
Stsc218783g00001 268 Pfam NB-ARC domain 26 262 IPR002182 GO:0043531
Stsc218783g00001 268 Gene3D - 3 172 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc218783g00001 Stsc-Chr218783 4 956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc218783g00001 39 231 WRKY Transcription Factor Family AT5G45050 27.451 7.38e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc218783g00001 - - aip:107627934 488.034