Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc218652g00001 ATGACATTTAAAACACTTGCTGAGGTTGGTTTGTTCTACAAAGAGTATGCAAAACGTGCAGGGTTTTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATCAATCAACTCATAACATGTAACAGACAAGGACAATGGACATCTGAGGTACCTTACGTTGAGAAGACAAAGCCTATCTGTGGTGCAAACTGTCCCGCACGAATTTATGCTCACGTAATAAAGACAACTCGAATGTGGCGCATTTCAAAAGTAGTTCTTCGTCATTCACATCCATGCTTCCCAGAGCAAGCTCAGATGTTAGCACAACACAGGGAGCTTAGCTTGGAAGTTCGTCGTATCATAGAAATCAACGATGTATCCG 376 0.4043 MTFKTLAEVGLFYKEYAKRAGFSTKIRNTNRCKETKEEINQLITCNRQGQWTSEVPYVEKTKPICGANCPARIYAHVIKTTRMWRISKVVLRHSHPCFPEQAQMLAQHRELSLEVRRIIEINDVS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc218652g00001 125 Pfam FAR1 DNA-binding domain 12 99 IPR004330 -
Stsc218652g00001 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc218652g00001 Stsc-Chr218652 42 417 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc218652g00001 FAR1 1.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc218652g00001 - - adu:110280446 152.91