Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2171g00002 ATGTTGCAGGCAAGACGAGCTTTGAGGGCGTTGCGGGCAGTGGTGAGGCTGCAAGCTATATTCCGCGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACCCTTAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCACGCGTCCACGCAAGGCTTATACTTTTGAACTAG 168 0.5357 MLQARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVHARLILLN 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2171g00002 55 Pfam IQ calmodulin-binding motif 12 29 IPR000048 GO:0005515
Stsc2171g00002 55 ProSiteProfiles IQ motif profile. 12 39 IPR000048 GO:0005515
Stsc2171g00002 55 PANTHER IQ-DOMAIN 5-RELATED 4 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2171g00002 Stsc-Chr2171 2560 3971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2171g00002 4 49 IQD Protein Family AT1G72670 86.957 5.86e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2171g00002 - - gmx:100788715 75.8701