Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc215876g00001 ATGGTTCCAAACATTGAAAGCCTAAGCCTAGACAACTGTAGAAGTTTAATTAAGGTGCATGAGTCTGTGGGAGCTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTTAAGACCATTCCAAGTCATTTCATGCTAAAATCACTTCGAACTCTCCTCCTCACTGGCTGCTCAAAACTAAGAAAGTTTCCTGAGATTGTGGGGAATATGGAACATCTTGAAGAAATTCTTCTCCAAGGAACAGCAATAAAAGAACTACCTCAATCGATTGAATTTCTGAGTGGGCTGAAGTTCTTATTCTTAGGGTCATGCCAAAATCTTGAGCATCTCCCCACTAGCCTTCAGAAGTTGCAACATCTTAATACTCTTGATCTCAGTGGCTGCTCTAAGCTTCAAAAGCTTCCAAAGCTTCCCCTAAATACAAGATATATAGACTTGAGTAACTGTAGATCTTTGACAAGCTTTCCAACATTGTCCAGCCCTTCAGATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTACGTTTGTTAACTGCCATAATCTAATAAATAAACATGTCCAGGAGCATATAACAAATCTCTTCCGTAGTAAGGATATTATGCTTCCAGAATATAATTCTTGTGAAGTTGTACTTCCAGGGAGCAAGATCCCAGATTGGTTTCAGTTCCAGAGCACTAATGATACTATTCATCTTGAGGTGTCTTCAAGTTTGTATGGTAAGCGCATTGAGGTGTTTTTCGGCGCAGTTTTTGAGTTGGATAAAGGTGCTACTACAACTGGCATGTTTACAGGTGAATTTGATGTTATTGTCAATGATATAAAGATACATATGTTTGGAAACCATTTTGAGGCACTAGACTCGACGCATATGTGGTTGGCTCGGTTGAAAGTTGATCATTTTATGTGGCACCTTAAGAGTATGCGGCATTGGAATCACTTTCAGATTTCTTTTTCGATCTTTGAAACAACATCAAAGGAGAAGATAAGAGCAACCTTGAAGAGCTGTGGTTTCCATGTTTAG 1035 0.3836 MVPNIESLSLDNCRSLIKVHESVGALDKLVTLNLLFCSNLKTIPSHFMLKSLRTLLLTGCSKLRKFPEIVGNMEHLEEILLQGTAIKELPQSIEFLSGLKFLFLGSCQNLEHLPTSLQKLQHLNTLDLSGCSKLQKLPKLPLNTRYIDLSNCRSLTSFPTLSSPSDFIAEDFPRFYQITFVNCHNLINKHVQEHITNLFRSKDIMLPEYNSCEVVLPGSKIPDWFQFQSTNDTIHLEVSSSLYGKRIEVFFGAVFELDKGATTTGMFTGEFDVIVNDIKIHMFGNHFEALDSTHMWLARLKVDHFMWHLKSMRHWNHFQISFSIFETTSKEKIRATLKSCGFHV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc215876g00001 344 SUPERFAMILY L domain-like 3 291 - -
Stsc215876g00001 344 Pfam C-JID domain 216 343 IPR045344 -
Stsc215876g00001 344 Gene3D Ribonuclease Inhibitor 1 245 IPR032675 -
Stsc215876g00001 344 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 70 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc215876g00001 Stsc-Chr215876 777 2463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc215876g00001 4 150 WRKY Transcription Factor Family AT4G12020 45.333 2.55e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc215876g00001 - - ahf:112749316 454.907