Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc215076g00001 ATGACGTTCATGAAAGGGATATGGAAATCAATGTTCCCAGGTTGTTACAAAGGAGAGTATCCATCAAGAAAGCCAAAGAGAGTGGTATCAACAAAGCCACCAATGTCATCACAGAGGGTCTCAGTGAGTGATTTGAGCTTCCCAAGCACAACATTCTCGGAAGATCTTTCCATCTCGCTGGCTGGAACAAACCTGCACGTGTTCACGCTGGCAGAGCTGAAGGTGATCACGCAGCATTTCTCTTCGAGTAACTTCCTCGGCGAAGGCGGGTTCGGACCGGTTCATAAGGGGTTCATTGATGATAAGCTAAGGCATGGACTTAAGGCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGCACCCAAGGCCATAAAGAGTGGTTGACTGAAGTGGTGTTCTTGGGTCAACTAAGGCATCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGATCATAGGCTTTTGGTATATGAATACTTACCAAGAGGCAGCTTAGAAAATCAATTATTTAGAAG 524 0.458 MTFMKGIWKSMFPGCYKGEYPSRKPKRVVSTKPPMSSQRVSVSDLSFPSTTFSEDLSISLAGTNLHVFTLAELKVITQHFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGTQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEDHRLLVYEYLPRGSLENQLFR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc215076g00001 174 ProSiteProfiles Protein kinase domain profile. 80 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc215076g00001 174 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Stsc215076g00001 174 Gene3D Phosphorylase Kinase; domain 1 42 162 - -
Stsc215076g00001 174 Pfam Protein tyrosine and serine/threonine kinase 84 172 IPR001245 GO:0004672|GO:0006468
Stsc215076g00001 174 PANTHER OS01G0588500 PROTEIN-RELATED 42 174 - -
Stsc215076g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 46 173 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc215076g00001 Stsc-Chr215076 53 1279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc215076g00001 66 173 Glycoside Hydrolase AT3G07070 49.074 1.47e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc215076g00001 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc215076g00001 - - gmx:100783759 321.627