Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc215065g00001 TTTTTATGTGTTGTTGATGACAAGTATGTGCCAAAGGTTGGCATGCTTTTCGAATCTCTTGAGGCAGCTAGGATTTTTTATAGGGATTATGCTAAACGTGCAGGCTTCTCTACAAAAATAAAGAACACAAATAAGAGTAAGAAATCAAATGAAATTCTAAACCAGCTTCTTTCATGTAATAGAGAGGGGAAAAGGAGGTCAGAGTTAGCAGTTTCAGAGAAGACAAATCCTATATTCGCTGCTAATAGTCCAGCGAGAGTCTACGTGCATCATTTGAAGATAATTGGACTTTGGGAGATATCAAAGGTGGCTTTAGGACATTCACACCCTTGCTGTCCAAGTCAAGTAGAATTGTTTCCCTAA 363 0.3829 FLCVVDDKYVPKVGMLFESLEAARIFYRDYAKRAGFSTKIKNTNKSKKSNEILNQLLSCNREGKRRSELAVSEKTNPIFAANSPARVYVHHLKIIGLWEISKVALGHSHPCCPSQVELFP 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc215065g00001 120 Pfam FAR1 DNA-binding domain 26 112 IPR004330 -
Stsc215065g00001 120 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc215065g00001 Stsc-Chr215065 2229 2591 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc215065g00001 FAR1 6.1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc215065g00001 - K13993 adu:110280446 144.05