Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214931g00001 ATGGCTGCAATTTTGTGCTATTCACAACCCTCCCTTCACCAGTTTTTCTTCTCATCCTTCCTTGTCTTTGTTCTATCAGCTTATTCAATTGAGTTCCAAATATCTAGGTTCACTCCTGGAGATCCGAACATAACTTATAGAGGACAAGCTGTACCTCGTGTTGGAACAATTGAATTGAACAATAATGTTGATTATGTATCCCAAGTTGGATCTGCAATTTACTCCAAAGATGTGCTCTTATATGAATCAAGCTCAGGAAAACAAGCTGATTTCACAACACACTTCACCTTTGTCATTGATACTCAAGGAAGATCAACATATGGTGCTGGTCTTGCCTTCTTCCTTGCACCTTCTGGATTCCAAATCCCACTAAACTCCGCCGGCGGCTTCCTTGGCCTCTATAACACATCAACTACCGACTCGTCGCACAATCAGATTGTTCATGTTGAGTTTGACTCCTTCCCTAATCCAGATTGGGATCCAAAGACAGAGCATGTGGGAATCAACATCAATTCAATTGCTTCAGCAGACTACACTCCTTGGAATGCTAGCAGGCATAGTAATGACATTGCTGATGCCTGGATTGCATACAATTCAAAATACAAGATTCTAAGTGTGTCATGGAAATACCACACAACCTCTACCTCTCAAGAGAATGCTAGTTTATCTCAAGAAATTGATTTGATGAAGGTCTTACCTCAATCAGCTACAATTGGATTTTCTGCAGCTACTGGTATATACATGGAACGGCATGTTATTCAATCATGGGAGTTCAAGTCTAGTTTGGGGGTTGTGGAGTCTACTAATAATAATGGGAAGAATTCAAAGAACAAATGGAAGGAGGTGGTGGCACCAATAACTGTTGTTTTGAATTTGATTATAGCAGCTATGATAGTGTATGCAATAATTAGAAGAAAGAAAAAGAAAAAAGATGCTGTTGAGAGGGTGAGCTCTATTGAGGATGTTGAAAGAGAAGCTGGACCAAGAAGATTCTCTTATGAAGAGATTGTCTTCGCCACCAATAACTTCTCTGCAAACAGGAAGCTCGGTCAAGGCGGATTTGGAGCTGTGTACAGAGGCTACTTTGCTGATCTAGATTTGGTTGTTGCTGTTAAGAAGATATCAAGCGGATCAAGACAGGGGAAAAGAGAGTACATAACTGAAGTCAAAGTCATCAGCAGGTTAAGGCATCGGAATCTTGTGCAGCTCATTGGTTCATGCCATGATAGAGGTGAGTTCCTTCTTGTTTATGAGTATATGCCAAATGGTAGCCTTGATTCCCATTTGTTTGGGAATAGGACCCCATTATCTTGGAACTTGAGGCACAAGATAGTTCTTGGATTGGCCTCTGCTATTCTGTATCTTCATGAAGAATGGGAACAATGTGTACTGCATAGAGATATAAAACCAAGCAATGTGATGTTGGATTCTAGTTTCAATGTGAAGCTTGGTGATTTCGGTTTGGCTAAGCTCATAGATCATGAGTTAGGGTCTCAGACATCAGCTTTGGCTGGAACAATTGGGTACATGGCTCCAGAATATATAAGCAGTCGTAGGGCAAGTAAGGAATCAGATGTGTATAGCTTTGGGTTGGTTGCATTAGAGATTGTGACTGGAAAGAAGGTGTTTGACCTTTTAGATGATCAAGACAGTCAAAAGGGGTTAGCTGAGTGGGTGTGGGATCATTATGGAAGAGAAGAGCTTCATATGGTTGTGGATGAGAGATTGCAGAAAGATTTTGATGAGAAAGAAGTGAAGTGTTTGATGATTGTTGGGCTGTGGTGTTGTCATCCTGATAAGAATTTGAGACCATCAATAAGACAAGCAATTCAAGTGCTGAATTTAGAAGGTTCATTGCCACAACTTCCAACAAAGATGCCTGTTGCTATATATTATATTCCTACACCTCCTGTCAGCAATTCGGATAATGCTTCCATTAGTGTTAGCCTCCAGTCAGAATTGGTCCTTATCCAACGTACTGCGAGGGTCGCTGCTGATTTCTTAGCCAAAAGTGCTGTTGATAAGCGTATAAGTTATGTTGAACTGCTTGAGCCATTGAATGACATGCACAATGTGTTACAGGGTGTTCATCACTCTTCAGCCGTGAAGAGTTAA 2115 0.409 MAAILCYSQPSLHQFFFSSFLVFVLSAYSIEFQISRFTPGDPNITYRGQAVPRVGTIELNNNVDYVSQVGSAIYSKDVLLYESSSGKQADFTTHFTFVIDTQGRSTYGAGLAFFLAPSGFQIPLNSAGGFLGLYNTSTTDSSHNQIVHVEFDSFPNPDWDPKTEHVGININSIASADYTPWNASRHSNDIADAWIAYNSKYKILSVSWKYHTTSTSQENASLSQEIDLMKVLPQSATIGFSAATGIYMERHVIQSWEFKSSLGVVESTNNNGKNSKNKWKEVVAPITVVLNLIIAAMIVYAIIRRKKKKKDAVERVSSIEDVEREAGPRRFSYEEIVFATNNFSANRKLGQGGFGAVYRGYFADLDLVVAVKKISSGSRQGKREYITEVKVISRLRHRNLVQLIGSCHDRGEFLLVYEYMPNGSLDSHLFGNRTPLSWNLRHKIVLGLASAILYLHEEWEQCVLHRDIKPSNVMLDSSFNVKLGDFGLAKLIDHELGSQTSALAGTIGYMAPEYISSRRASKESDVYSFGLVALEIVTGKKVFDLLDDQDSQKGLAEWVWDHYGREELHMVVDERLQKDFDEKEVKCLMIVGLWCCHPDKNLRPSIRQAIQVLNLEGSLPQLPTKMPVAIYYIPTPPVSNSDNASISVSLQSELVLIQRTARVAADFLAKSAVDKRISYVELLEPLNDMHNVLQGVHHSSAVKS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214931g00001 704 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
Stsc214931g00001 704 CDD lectin_legume_LecRK_Arcelin_ConA 30 262 IPR001220 GO:0030246
Stsc214931g00001 704 CDD STKc_IRAK 349 614 - -
Stsc214931g00001 704 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Stsc214931g00001 704 Gene3D - 28 266 - -
Stsc214931g00001 704 PANTHER - 59 615 - -
Stsc214931g00001 704 Pfam Legume lectin domain 30 271 IPR001220 GO:0030246
Stsc214931g00001 704 ProSiteProfiles Protein kinase domain profile. 343 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc214931g00001 704 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc214931g00001 704 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 262 IPR013320 -
Stsc214931g00001 704 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Stsc214931g00001 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Stsc214931g00001 704 SUPERFAMILY Protein kinase-like (PK-like) 327 640 IPR011009 -
Stsc214931g00001 704 FunFam Lectin-domain containing receptor kinase A4.3 420 633 - -
Stsc214931g00001 704 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Stsc214931g00001 704 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc214931g00001 704 FunFam L-type lectin-domain containing receptor kinase IX.1 28 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214931g00001 Stsc-Chr214931 232 2612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214931g00001 19 632 Receptor kinase-like Gene Family AT5G10530 56.000 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc214931g00001 Pkinase 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214931g00001 - - adu:107487060 1045.8