Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214816g00001 ATGACTGAAATTGCTACTGGTGCGGCCGGAACACTCTTGGCCAATCTAGTAACAAAATCATTCAAAGAGATTGCTCTGGCATTTGGTCTTGAAGATGATGTAGAAAAATTTCGAAGTTCTTTGGAAATCATCAACGCATATCTTTTAGATGCCGAGGACAAGCAAGCAAAGTACAAAAGTGTAACTGTGTGGTTGAAGCAACTTAGAGAGGCATTTGAGGATGCTGGTGACATATTGGATGAAATAGAGTACGAGGCAAAACGTAATGAAGTGATCAAACTGTATGGAAGCATTGGAACCAAGCTACACCGATTCTTCTCGTATAAAAGCAATCCACTCGTATTCCGCAACAGGATGGCTCACAAAATCAGAAATATGAAATTGAAGATAGATGAAAAAACAAAAGAAGGGAAGAAGATGGGTATAGTTAAACAACATGTCAACACTCCAACAGTAGAGCGCAATTTACCATGGCGAGAAACTAGTTCTTCGTTGTCCTTACGTGTGTGTGGTAGAGTTAAAGAGAAAGAGAAGATCATAGAGTTATTAATGGGACAACATTCAGAGGCTGGTAATGTTGATGTGATATCTATTGTTGGGATCGGAGGTTTGGGGAAGACTACACTTGCTCAAATGGTTTATGATGATGATAGAGTGAAGGGCCATTTTAATATGTTAATGTGGGTCTGTGTGTCTGATGATTTTGATGTGAAGATGTTAATACAAAAAATTATTCATGCTGCCTCAAAGACAGAGAATGTAGTTGATGCAAATTCTAGTTTGGAACATATGGTGTCTTTCCTCAATGAAAAGTTACGTGGTAAGAAGTTCTTGCTCGTGTTGGACGATGTTTGGAATGAAGACCACAACAAATGGGATGAATTGAAAAATTACTTGTTGAAGGCAGGGAGTGAGAGAGAATCAAAAGGGAGCAAAATCATAGTGACCACTCGCAGCAAAAATGTTGCTTCTATCGAGGGGAATCGTCTTCTAATTGAGTTAGAAGAACTTCCTGAGGATGAATGTTGGAAACTCTTTGTCAAATGTGCATTCCAAGAAGAAAGTGAAGAGGAGAAGTACCCAAGGCTTAA 1091 0.3905 MTEIATGAAGTLLANLVTKSFKEIALAFGLEDDVEKFRSSLEIINAYLLDAEDKQAKYKSVTVWLKQLREAFEDAGDILDEIEYEAKRNEVIKLYGSIGTKLHRFFSYKSNPLVFRNRMAHKIRNMKLKIDEKTKEGKKMGIVKQHVNTPTVERNLPWRETSSSLSLRVCGRVKEKEKIIELLMGQHSEAGNVDVISIVGIGGLGKTTLAQMVYDDDRVKGHFNMLMWVCVSDDFDVKMLIQKIIHAASKTENVVDANSSLEHMVSFLNEKLRGKKFLLVLDDVWNEDHNKWDELKNYLLKAGSERESKGSKIIVTTRSKNVASIEGNRLLIELEELPEDECWKLFVKCAFQEESEEEKYPRL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214816g00001 363 Coils Coil 65 85 - -
Stsc214816g00001 363 PRINTS Disease resistance protein signature 271 285 - -
Stsc214816g00001 363 PRINTS Disease resistance protein signature 195 210 - -
Stsc214816g00001 363 Gene3D - 152 330 IPR027417 -
Stsc214816g00001 363 PANTHER DISEASE RESISTANCE PROTEIN RP 64 349 IPR044974 GO:0006952
Stsc214816g00001 363 Pfam Rx N-terminal domain 10 97 IPR041118 -
Stsc214816g00001 363 Gene3D - 8 129 - -
Stsc214816g00001 363 FunFam Probable disease resistance protein At1g61300 152 329 - -
Stsc214816g00001 363 Coils Coil 116 136 - -
Stsc214816g00001 363 Pfam NB-ARC domain 175 358 IPR002182 GO:0043531
Stsc214816g00001 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 358 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214816g00001 Stsc-Chr214816 3100 4275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214816g00001 172 358 WRKY Transcription Factor Family AT5G45050 26.316 1.12e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214816g00001 - - adu:107472938 527.709