Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214701g00001 ATGGGAGGTAGAATTTCAAGTGTCACTACTACTTTTGCAATCATACTGGTTCTCTTAGGCACAATAACATGTGAAGCACAGTTATCTTCAACATTTTATGATAATTCATGCCCCAATGCACTCTCCACTATCCGAACCACCATTCGCACAGCGGTTTCTAAGGAGCGCCGCATGGCGGCTTCTCTTGTTCGCCTTCATTTCCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTAGATGATAGCCCTACAATTGTGGGTGAGAAAGGCGCATTTGCTAATAATAACTCAATTAGAGGATATGAAGTCATAGATGAAGCTAAAGCTGCCGTAGAGAAAGTATGCCCTGGAGTGGTTTCGTGCGCAGACATTGTTGCTGTAGCTGCTCGTGATGCATCATTCGCGGTTGGTGGTCCATCATGGGTTGTGAAGCTTGGACGCAGAGATTCAACTATCGCAAGTATTATTTTGGCTAACACTGATCTTCCACTTGCCTCAGATGATCTTACAACTCTCATCTCTAAATTCAGTAACAAAGGACTTAGT 552 0.4348 MGGRISSVTTTFAIILVLLGTITCEAQLSSTFYDNSCPNALSTIRTTIRTAVSKERRMAASLVRLHFHDCFVQGCDASILLDDSPTIVGEKGAFANNNSIRGYEVIDEAKAAVEKVCPGVVSCADIVAVAARDASFAVGGPSWVVKLGRRDSTIASIILANTDLPLASDDLTTLISKFSNKGLS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214701g00001 184 Gene3D - 31 164 - -
Stsc214701g00001 184 FunFam Peroxidase 31 173 - -
Stsc214701g00001 184 Pfam Peroxidase 45 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc214701g00001 184 ProSiteProfiles Plant heme peroxidase family profile. 27 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PANTHER PEROXIDASE 72-RELATED 24 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 Gene3D Peroxidase, domain 2 165 184 - -
Stsc214701g00001 184 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc214701g00001 184 SUPERFAMILY Heme-dependent peroxidases 27 184 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214701g00001 Stsc-Chr214701 16 895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214701g00001 7 184 Peroxidase AT1G14550 60.335 8.40e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214701g00001 K00430 - gmx:100786161 275.404