Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214636g00001 ATGGGTTTCCATTTTCCTGTCATCCGAAAGGCGTCACTCTCATCTAAGCAAGCTGCTTCGAGATCCGTAGAAGTCCCAAAAGGGTATCTTGCAGTGTATGTCGGAGAGAATCAGAAGCGTTTTGTGATCCCCATCTCATATTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCACAATTCCTTGCAGTGAACATGTCTTCCAGTTAATCACATCTCGCTTGAACTGA 273 0.4469 MGFHFPVIRKASLSSKQAASRSVEVPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQLITSRLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214636g00001 90 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Stsc214636g00001 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214636g00001 Stsc-Chr214636 2701 3137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214636g00001 6 85 Calmodulin-binding Proteins AT3G43120 44.444 1.99e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214636g00001 K14488 - gmx:106794448 157.918