Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214499g00001 ATGCCTCCTCCATTTGATGCTGTTGCTAAAATCCATCCTCCTAGAGAGGCATGGAGACTTAAAGTCAGGGTATTGAGGTTGTGGATTATTCCCTCTTTTGGGAATCATGATGTCCCTAACTCAATGGTGCTTATTTTGCTTGATGAGGATTCAACCAAAATTCAAGCAACTATTAAAAAACAATTGCTGAATAGGTTCAAGGAGCAGATAAGTGAGGGGCAGGTTTATCAAATGTCATATTTCAGTGTTGTGCCCAATCAAGGTGGTTATCAAGCCGCAGAACATGAATTTAAACTGATCTTCCTGAATCGCACCACTCTTGTTCCTATTACAGATGACGCAATACCCCGTAGTTGCCTCAGTCTGTATCAGTTTTCTGATATCTTGAACATGGTTGATGACCATGAGTATTAG 414 0.4058 MPPPFDAVAKIHPPREAWRLKVRVLRLWIIPSFGNHDVPNSMVLILLDEDSTKIQATIKKQLLNRFKEQISEGQVYQMSYFSVVPNQGGYQAAEHEFKLIFLNRTTLVPITDDAIPRSCLSLYQFSDILNMVDDHEY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214499g00001 137 CDD RPA1_DBD_A_like 19 106 - -
Stsc214499g00001 137 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Stsc214499g00001 137 Gene3D - 5 113 IPR012340 -
Stsc214499g00001 137 Pfam Domain of unknown function DUF223 44 129 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214499g00001 Stsc-Chr214499 2521 3730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214499g00001 2 134 Core DNA Replication Machinery Family AT5G45400 26.667 9.94e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214499g00001 - - ahf:112778577 219.164