Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214153g00001 ATGAAGGGTGAGGCGAATGTGTTGAACGGGTTGAGACCAGTAATACTTATGGTGTTGGTGCAGGTTGCATTTTCTGCTGTGAACGTGTTATACAAGCTTGCTATCAATGATGGAATGAGTGTTAAGGTTCTTACTGCTTATCGTCTAGCTTTTGGTGCTGTTTTCACTGTTTCTCTTGCTCTCTTTTCTGAAAGGAATAAGAGGCCAAAGATGACTTGCAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGATGTTTGTTTCAGAACCTTTTCTATGGGGCACTGGCTTTAACATCAGCAACTTTTGTGTCTGCCATCTACAACCTGATACCAGGCATCACTTTTGTGTTGGCCATAACCTTCGGTTTTGAGAAATTGAAACTTGGGGAAGCAGCAGGGAAGGCCAAGGTGTTTGGAACTTTGATTGGAATCGCTGGGGCTATGGTCTTGACTTTTCTCAAAGGGATGCATATTAATATATGGCCATTCCATGTCAACCTTTTGAAGAACAATAATCCATCATCATCACATCACCAATCTTCGCATAGCAGTAAGGACTTGTTGGGGGTTGTGTGCGCCATAGCAAGCTGCTTCTCTAATGCTTTCTATCTTATCATTCAAGCTAAGATGAGCAAGGAATACCCAAGTTACAACTCAAGCACAGCCTTGATGCTTACAGCTGCAGCAATTCAAGCCACAGTTTTTGCTCTTTGCAGTGAGAGGGATCTCTCTCAATGGAAGCTTGGTTGGAATATCAGGCTATTGGCTTCCGCTTATTCGGGAATAGTGGGATCTGGAGTAGTGTTTCTTATGATAGCATGGTGCATACAAATGAGAGGGCCACTATTTGTTTCCATTTTCAACCCTCTCATGCTTGTTCTTGTGGCTGTTGTGGCTTCTTTCATGTTAGATGAGCAATTATATTTGGGAAGTGTGATTGGATCAGTGATGATAGTGTGTGGACTATACACGGTTCTATGGGGAAAGAACAAAGACATGAAAATGGTATCACAGTTGGTGCCATCTGAAATCATCAACCAGCAGCAGCAGCAAGAGGATCAAGCTATACCAGTTATTGTTACCTCCACGCCAGTTGTGATAAACCATGACAAATGTGACCAACAACAATAA 1140 0.4272 MKGEANVLNGLRPVILMVLVQVAFSAVNVLYKLAINDGMSVKVLTAYRLAFGAVFTVSLALFSERNKRPKMTCRVLFMSFLCGLFGGCLFQNLFYGALALTSATFVSAIYNLIPGITFVLAITFGFEKLKLGEAAGKAKVFGTLIGIAGAMVLTFLKGMHINIWPFHVNLLKNNNPSSSHHQSSHSSKDLLGVVCAIASCFSNAFYLIIQAKMSKEYPSYNSSTALMLTAAAIQATVFALCSERDLSQWKLGWNIRLLASAYSGIVGSGVVFLMIAWCIQMRGPLFVSIFNPLMLVLVAVVASFMLDEQLYLGSVIGSVMIVCGLYTVLWGKNKDMKMVSQLVPSEIINQQQQQEDQAIPVIVTSTPVVINHDKCDQQQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214153g00001 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Stsc214153g00001 379 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Stsc214153g00001 379 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Stsc214153g00001 379 PANTHER WAT1-RELATED PROTEIN 13 345 IPR030184 GO:0016020|GO:0022857
Stsc214153g00001 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214153g00001 Stsc-Chr214153 3777 5301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214153g00001 11 356 Nodulin-like Gene Family AT1G25270 42.120 3.06e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214153g00001 - - gmx:100798755 500.745