Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc214081g00001 ATGCTTGATACCCAAGGCTACCTTGTGTTGTTCCTTATATGGTTCATCTCCATCATTTTAATCAAATCTTTCTTGACAAGGTCCCAAAGCCATAAACTCCCCCCAGGTCCCCCAATTTCCTTGCCACTTCTCGGTCACGTGCCTTACCTCGGATCCCTCCTTCACCAAGCCTTATACAAGCTATCACTGCGCTATGGACCGCTTATTCACGTTCTCATTGGTTCCAAACACGTTGTGGTTGTTTCTTCAGCAGAAATGGCGAAGCAGATTCTTAAGAATAATGAGGAATCCTTCTGCAACCGTCCGACCATGATCGCCAGCGAGAGTTTGACGTATGGCGCTGCAGACTACTTCTTCGTTCCGTACGGAACATACTGGAGGTTCCTTAAGAAGCTCTGCATGACGGAGCTTCTTAGCGGAAAAACCCTAGAACACTTCGTCGGCATTCGCGAGGACGAAGTGGAGGCGTTTCTAAGGAACATTCTAGAAATATCTAAGACCGGAAAGGCGTTCGAGATGAGGCAGGAGTTTATGAGGCATGCAAACAACGTAATCTCGAGGATGACGATGGGGAAGAAGAGCATCAAGAACGACGACGACGTTGCGACGGTGAGGAAGTTGATTAGGGAAGTTGGGGAGCTTCTTGGGGCGTTTAATTTGGGGGATTTAATTGGGTTCATGAGGCCTCTTGATGTTCAAGGGTATGGGAAGAAGAACTGGGAAACGCATCACAAATTGGATGTGATGATGGAGAAGTTTTTTAAGGAGCATGAAGATGCAAGGTCTGGTGATAGCGACAGGAAGAAGGACCTCTTTGACATTCTCTTGAACCTAATTGAAGCTGACGGCGATAATAAACTTACCAGAGAAAGTGCCAAAGCCTTTGCCCTGAGGATAAGGGTTCGAAACCCATGTCTCGGCCGAGTTTCGATTCAGTCCGATCGACTAATTTCCGGTCGATTCACCAGTTCAATTCCGATTTTCATGGTAACAGTTACCAGTGCTGATTTGGACCGTGATTCTGGCTTGGTGATGCGTGAGCATCTTTAG 1050 0.4705 MLDTQGYLVLFLIWFISIILIKSFLTRSQSHKLPPGPPISLPLLGHVPYLGSLLHQALYKLSLRYGPLIHVLIGSKHVVVVSSAEMAKQILKNNEESFCNRPTMIASESLTYGAADYFFVPYGTYWRFLKKLCMTELLSGKTLEHFVGIREDEVEAFLRNILEISKTGKAFEMRQEFMRHANNVISRMTMGKKSIKNDDDVATVRKLIREVGELLGAFNLGDLIGFMRPLDVQGYGKKNWETHHKLDVMMEKFFKEHEDARSGDSDRKKDLFDILLNLIEADGDNKLTRESAKAFALRIRVRNPCLGRVSIQSDRLISGRFTSSIPIFMVTVTSADLDRDSGLVMREHL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc214081g00001 349 Gene3D Cytochrome P450 25 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc214081g00001 349 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc214081g00001 349 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc214081g00001 349 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc214081g00001 349 PANTHER CYTOCHROME P450 93A3-LIKE 9 297 - -
Stsc214081g00001 349 SUPERFAMILY Cytochrome P450 28 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc214081g00001 349 Pfam Cytochrome P450 34 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc214081g00001 Stsc-Chr214081 84 2335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc214081g00001 1 299 Cytochrome P450 AT5G06900 37.748 4.41e-70 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc214081g00001 K24188 - ccaj:109793235 454.136