Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213g00010 ATGGCTTCCAAGAACTCCGATCCACCAACTGCACCGATCATATTCCTTCCCTTGACGTCATTGCTGCCAAAGGCATCACAAAAGGCTTTGACACTTATCACACTAGAGTTAAAGATTGGGGGTGGTGACTGTGTAAGTCTATGGGAGCACATGAGCAACTCAAACCCTAGCCTCTTCTTTGTCCATCGCTATCGCCACCATGCCGCCGCCCTCGTCGCCGCGCGTCTTCTTCTTTTTCTTCTTCTTTGCGCGATCTACATGCTCAAGACAGGAACAAAAACCTCGAAGCAGAACGCAGCGTGCGCGCTTCTCAACTTAACGCTGGTGGAGGAGAGCAAGAGCTCGATTGGCGCATTCAGTCCGATTCCGCCATTGGTGTCACTGCTGAAGAACGGCTCCAGCTGCAGGAAGAAGGACGCGATGACGACTCTTTATAAGTTGTGCTCGCTGAAGCAGAACAAATAA 465 0.5097 MASKNSDPPTAPIIFLPLTSLLPKASQKALTLITLELKIGGGDCVSLWEHMSNSNPSLFFVHRYRHHAAALVAARLLLFLLLCAIYMLKTGTKTSKQNAACALLNLTLVEESKSSIGAFSPIPPLVSLLKNGSSCRKKDAMTTLYKLCSLKQNK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213g00010 154 SUPERFAMILY ARM repeat 86 150 IPR016024 -
Stsc213g00010 154 Gene3D - 61 154 IPR011989 -
Stsc213g00010 154 PANTHER U BOX DOMAIN-CONTAINING 85 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213g00010 Stsc-Chr213 50043 51092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213g00010 85 154 U-box Gene Family AT2G28830 44.286 8.84e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213g00010 - - tpra:123898555 110.538