Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213g00006 ATGAACGACTCAGATGTCTCCAAGCAGATCCAGCAGATGGTTAACTTCATCCGCCAGGAAGCTGAAGAGAAAGCCAACGAGATCTCCGTCTCCGCCGAAGAAGAATTCAACATCGAGAAGCTGCAGTTGGTTGAATCGGAAAAGAAGAAGATCAGGCAAGAGTACGAGCGCAAACAGAAGCAAGTCGAAGTTCGCAGGAAGATTGAGTACTCGATGCAGCTGAATGCTTCTCGGATAAAAGTTCTTCAAGCACAAGATGATGTGGTTGGTTCCATGAAAGAAGCTGCATCCAAGGAGCTTTTGAATGTGAACCATCATCATCATGTGTACAGAAACCTTCTGAAAGACCTCATTGTTCAGAGTTTACTAAGGCTGAAAGAACCTTCTGTCTTACTGAGATGTCGGAAAGAAGATGTACACTCGGTAGAGCATGTACTGGACTCAGCTGCACAGGAGTATGCTGAGAAAGCAAATGTTCATCCACCAGAGGTCATTGTTGACCGCGAGGTGTATCTTCCACCTGCACCCAGCCATCACAATGTCCATGAACCATACTGGTAA 561 0.4599 MNDSDVSKQIQQMVNFIRQEAEEKANEISVSAEEEFNIEKLQLVESEKKKIRQEYERKQKQVEVRRKIEYSMQLNASRIKVLQAQDDVVGSMKEAASKELLNVNHHHHVYRNLLKDLIVQSLLRLKEPSVLLRCRKEDVHSVEHVLDSAAQEYAEKANVHPPEVIVDREVYLPPAPSHHNVHEPYW 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213g00006 186 Gene3D - 92 179 IPR038495 -
Stsc213g00006 186 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
Stsc213g00006 186 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 180 IPR002842 GO:0033178|GO:0046961|GO:1902600
Stsc213g00006 186 Coils Coil 41 61 - -
Stsc213g00006 186 SUPERFAMILY V-type ATPase subunit E-like 87 159 - -
Stsc213g00006 186 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213g00006 Stsc-Chr213 28300 29991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213g00006 1 186 Primary Pumps ATPases(2) AT1G64200 71.354 5.84e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213g00006 K02150 - gmx:100500452 316.62