Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213966g00001 ATGGGCCGCAACAGGGATGGCATCTGGTTTCGATCATCTACTCCGATACTATTCCAGATGTACCCCGTTGTTTCCTTGGAGGAGCTGAAATCTGTTATATTGCGCAATATGAGGCTGGGGGCTGTTGGAACGATCGAGGAGCATGTGCGTGCTCTGTTTGATCTGCACCGTAGGTACGGGACTCGTGAAGTGATGGAGCTGCTTACTGAGATGCAGAGCATTCTCGATGTTGCTGCCACAACTAACAGAGAAGTTGATGGCCACATACCGAATTACCCGAGTTTGCTGCCCCAGTTGATTTGCCAACTTCACAATGTTACGATGCATGCAGATGTTGAAACGGATGAAGTTTATGCCCAAATGACACTGCAGCCGTTAACTCCGCAGGGGCAGAAGGATACGTTTCTTCCCATGGAATTGGGAGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACCTTAACGGCTAGTGACACCAGCACACATGGAGGGTTTTCCGTTCCACGTCGTGCAGCTGAGAAAGTTTTCCCTCTGCTGGATTTCTCACAGCAACCTCCTACGCAAGAACTAACGTTGAGTGGAAATTTTGTCATATTTTTAGGG 606 0.4818 MGRNRDGIWFRSSTPILFQMYPVVSLEELKSVILRNMRLGAVGTIEEHVRALFDLHRRYGTREVMELLTEMQSILDVAATTNREVDGHIPNYPSLLPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQGQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPLLDFSQQPPTQELTLSGNFVIFLG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213966g00001 202 Gene3D - 149 196 IPR015300 -
Stsc213966g00001 202 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 77 192 IPR044835 GO:0003677|GO:0006355|GO:0009725
Stsc213966g00001 202 SUPERFAMILY DNA-binding pseudobarrel domain 135 194 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213966g00001 Stsc-Chr213966 1703 3207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213966g00001 77 191 B3 DNA Binding Superfamily AT1G30330 86.957 3.23e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213966g00001 - - gmx:100780393 228.794