Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213772g00001 ATGGAGTTTGAGTCAAAATTGGTCTCTGGAGAAAATGAGATTTATGCGAAGATACAACTTGTTGCAGAGTCAATTGTAGTAGATGCGCGTCGAAGGGGCCCAATCATGTGTGGTGGCAACAAGAGTGCAGTGAGCCTAGCAATTGTGCCAATCTTGAGCTCGATGCAGATTATGCTTGGTGGCACCAAGGAAGGACCGCCATTTGCGGAGCTGCATTTCCGTATCGAGTCACCAAGTGTGAACCTACTTGATGCGTGCGTTGCAGCTGAAGCAATTGAAGTGCGCGTTGTGGACGAATCGGCATCGTCTCTTCCAACAGGAAGGAATAACGATTTCATCAGAGGAAAAGTAGTTGTCATCGACATAAGTAGCAGCAGCAGCAAGCTTAAGGCCTATGCGGAAAGGTCTCCTTCCCATGCTCATGAGACCAGTATTGCAGAGACTTTACTTCAAGGTATTGAATTCCAATTTTCTATAATTCATGGGAAGCATGAAGAACTAAACAACGACTTGATTAAGAAGGGCATGGAGATAGTTCATAAGTGTATTGATGATGCTAAGATGGAGAAAAGGGAGGTACATGAAGTGATCAATGTTCATAAAGTTGTTGCCTATGGTTTTGCATTATTTCAAGCTACTGTGTTTAGTAAAAGTTATAGCATTGTACCAAACACAACACTAGTTGATGTCACTTCCCTGTCACTTGGTGTAGCCACTCATGGAGATTTAAGGAGTGTAGTGCTCCTGAAGAACACTGTCTTTCATGAAAATAATTTGCTTGGGGTATTTTTGTTTGAAAAGCTCTCTCTTGTTTGTCAGGTCCATCATGTCAATGGTAGCTTTAAATTCGATTTTCATGGTATCTTAAATCACTCTGAAGAAGCAGAAAAGATTGCTTGGTCCATTATCATTATTGATGAGATTCATTCAATTGCAATTAAGTGGGAGAAGACATATGGTGAATGTTAG 969 0.4128 MEFESKLVSGENEIYAKIQLVAESIVVDARRRGPIMCGGNKSAVSLAIVPILSSMQIMLGGTKEGPPFAELHFRIESPSVNLLDACVAAEAIEVRVVDESASSLPTGRNNDFIRGKVVVIDISSSSSKLKAYAERSPSHAHETSIAETLLQGIEFQFSIIHGKHEELNNDLIKKGMEIVHKCIDDAKMEKREVHEVINVHKVVAYGFALFQATVFSKSYSIVPNTTLVDVTSLSLGVATHGDLRSVVLLKNTVFHENNLLGVFLFEKLSLVCQVHHVNGSFKFDFHGILNHSEEAEKIAWSIIIIDEIHSIAIKWEKTYGEC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213772g00001 322 Pfam Hsp70 protein 103 198 IPR013126 GO:0005524|GO:0140662
Stsc213772g00001 322 Gene3D Actin; Chain A, domain 4 133 174 - -
Stsc213772g00001 322 Gene3D - 175 199 - -
Stsc213772g00001 322 PANTHER HEAT SHOCK PROTEIN 70KDA 133 199 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213772g00001 Stsc-Chr213772 101 1069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213772g00001 133 294 Calmodulin-binding Proteins AT3G12580 30.180 4.30e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213772g00001 - - aip:107637015 93.2041