Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213707g00001 AAGAATTCTTTTTTCTGGTTTGGGGGAATACCAAGGTTGATTGTTACAGATCCCGAGCTAATCAAAGATGTATTCAACAAGATCTATGATTTTCCAAAGCCTGATACAAATCCATTAATCAAGTTACTCGCTAATGGTCTTGCTGGGCATGAGGGTGAGAAGTGGAGCAAACATAGAAGAATAATCAACCCCGCATTTCATTTAGAAAAGTTGAAGCTTATGATGCCAATATTCCTCAAAAGCAGCAATGACATGATAAGTAGATGGGAGAAAATATTGTCTTCGAATGTATCTTGTGAGATAGATGTGTGGCCTTTTCTTCAAAATTTGACCAGTGATGTCATTTCTCGGGCAGCATTTGGAAGCAGTTACGAAGAAGGGATACGAATATTTGAACTTCAAAAAGAACAACTTAAACTTACAATAGAAGTTATAATGAAAATCTACATACCGGGATGGAG 461 0.3688 KNSFFWFGGIPRLIVTDPELIKDVFNKIYDFPKPDTNPLIKLLANGLAGHEGEKWSKHRRIINPAFHLEKLKLMMPIFLKSSNDMISRWEKILSSNVSCEIDVWPFLQNLTSDVISRAAFGSSYEEGIRIFELQKEQLKLTIEVIMKIYIPGW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213707g00001 153 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 153 - -
Stsc213707g00001 153 Pfam Cytochrome P450 5 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213707g00001 153 SUPERFAMILY Cytochrome P450 4 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213707g00001 153 Gene3D Cytochrome P450 3 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213707g00001 153 PRINTS Group II E-class P450 signature 109 127 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213707g00001 153 PRINTS Group II E-class P450 signature 52 72 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213707g00001 Stsc-Chr213707 2931 3591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213707g00001 1 152 Cytochrome P450 AT3G14620 60.131 4.18e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213707g00001 - - gmx:100808323 246.128