Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213513g00002 ATGCATCTCATCAAACACAATTTGAAAGAAGCTCTCAAGGCAATCTTTATGGATTCGCTAGAGTTGTTTATTCCAATATTTGTAGCCATTTTCTTATTCTTAGTCATCCATATTTGGAAGTCCAATAATAGAAATAGCCCTGTCACAAAATGGCCCTTAATTGGGGTTTTGTGTAACTTGTCTAGTATCCATGATTACGCAACCACATCTTTGAAACTCCATGGAGGCACTTTGAAGTTCAAAGGATCCTGGCTCACAAACATTAAGTTTGTGCTCACCAGCGATCCTACGAATGTGCACCATATTACAACTAAGAACTTTAGCAACTATGGCAAAGGTTCTCAGTTCAAGGAGAACTTTGAAATTTTCGGAGATGGGGTTTTTAATTCTGATTCCCACAAATGGCAGTTCAATAGGAACTTACTACACGCAATTTTCAGGAAAAGCACTTTTGAGAGCTTAGTTATAAAAACCGTTCATGAGAAGATGGAGAGTTGCCTGATTCCACTTCTCTACCATGCATCAAAGGCTGGAACACCCGTGGACTTGCAAGATATCTTTCAAAGGTTCACATTTGACAACATTTCCTCCATAGCCTTGGGATTTAATCCTAACAGTCTCCCTAACAACTTCACCAAAGGAGGAGTATTATTATTACCAGAAGTAGCTTTCGAGAAAGCTTTCAACGAAATGGAGGATGCAATTTTCTACAGACACATTGTCCCAAGATGGTTGTGGAAGCTTCAGAAATGGCTCCAAATTGGATCAGAGAAGAGCTACAGTGAATCCCAACATATTATTGATAAATTCTTGCATGAATGTATATCATCAAGACTTGATGATGAAAGAATGAAAAGCATGTTCAACAACGATGATGAAGAATCAAACTTTGACATGCTCAATGCTCTTGTCAAGGAAAATGGAGATGAAATGAAACAAATTGATTATAAGTTTCTAAGAGACACTGCTATTAGTCTGTTAGGAGCAGGAAGAAGTACAATTACTGCTGCTCTCTGTTGGTTTTTCTGGCTTGTCTCAACTCACCCTCTTGTTGAAGCCAAGATCCTTGAAGAACTCCAACAAAACTTTACAACCAAAGAAACAAATTGGGTCACTTCAGGAGTGAAGAATAATCTTAAGAAACTAGTTTATCTTCATGGAGCAATATGTGAAGCATTGAGACTTTTTCCTCCGGTGCCGTTCGATCACAAATGCGCCGTCCACTCCGATGTACTTCCGAGCGGCGTTCGTGTTAGTCCAAACACCATGGTGTATTACTCTCTATACTCAATGGGAAGGATGGAGCAAATTTGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCAAAAAAGGGGAGCAACATGAACGTACCATCTTACAAGTTCATAACTTTCAATTCTGGCCCTAGAAGTTGTTTAGGTAGAAATATAAGCTTTATTCAAATGAAGATCATTGCCGTTGCTCTGCTTTCCAACTTTCATATGCAAGTGGTGGAAGGCCATATTGTGTGTCCAAGTCTTTCTATTGTTCTTCACATGAAACATGGCTTGAAGGTCATAGTTTCTAAAAGAGGCAATTGA 1590 0.3899 MHLIKHNLKEALKAIFMDSLELFIPIFVAIFLFLVIHIWKSNNRNSPVTKWPLIGVLCNLSSIHDYATTSLKLHGGTLKFKGSWLTNIKFVLTSDPTNVHHITTKNFSNYGKGSQFKENFEIFGDGVFNSDSHKWQFNRNLLHAIFRKSTFESLVIKTVHEKMESCLIPLLYHASKAGTPVDLQDIFQRFTFDNISSIALGFNPNSLPNNFTKGGVLLLPEVAFEKAFNEMEDAIFYRHIVPRWLWKLQKWLQIGSEKSYSESQHIIDKFLHECISSRLDDERMKSMFNNDDEESNFDMLNALVKENGDEMKQIDYKFLRDTAISLLGAGRSTITAALCWFFWLVSTHPLVEAKILEELQQNFTTKETNWVTSGVKNNLKKLVYLHGAICEALRLFPPVPFDHKCAVHSDVLPSGVRVSPNTMVYYSLYSMGRMEQIWGKDCLEFKPERWISKKGSNMNVPSYKFITFNSGPRSCLGRNISFIQMKIIAVALLSNFHMQVVEGHIVCPSLSIVLHMKHGLKVIVSKRGN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213513g00002 529 Gene3D Cytochrome P450 30 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 Pfam Cytochrome P450 49 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 SUPERFAMILY Cytochrome P450 39 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc213513g00002 529 PANTHER CYTOCHROME P450 36 522 - -
Stsc213513g00002 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Stsc213513g00002 529 CDD CYP86A 80 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213513g00002 Stsc-Chr213513 3890 5745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213513g00002 20 529 Cytochrome P450 AT2G23180 41.040 8.42e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213513g00002 - - gmx:100791312 585.489