Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213174g00002 ATGGAGGTGGAAAATAAGACCCTGTTTGGGAAGTATCAAATTGGTAGGCTTCTAGGTAAAGGAACATTTGGAAGGGTCAACTATGGCAAGGAAATAGCAACGGGTGAAAGTGTGGCAATCAAAGTGATTAACAAAAGCAAGGTGAAGAAAGAAGGCATGGTGGATCAAATTCAGCGCGAAATATCAGTGATGCACTTAGTTAGACACCCCAACATAGTAGACCTACGAGAAGTGTTGGCTACAAAGACGAAAATCTTCTTTGTCATGGAATACGCTCGCGGGGGTGAGCTCTTCGCCAAAGTTGTAAAAGGAAGACTTAGCGAAGAGCTAGCGCGCAAATATTTCCAACAACTCATAAGTGCCGTGGCTTTTTGTCATAGTTGCGGTGTCTCTCATCGAGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGAATGAAAATCTGAAAGTATCTGATTTTGGTCTTTCTGCTTTGCCAGAACAACTCTGGAATGATGGACTCCTACATACGCAATGTGGGACTCCATCATACGTGGCACCTGAGATACTCCGTAAAAAAGGATATGACGGATCAAAGGCAGATATATGGTCTTGCGGGATCATATTATATGCCTTGTTGGCAGGGTATCTACCCTTCCAACATGAGAATCTTATATACTTGTATACCAAGCTACTTAAAGCCGAGTTCGAGTTCCCTCCTTGGTTCTCTCTTGAATCAAGGACGTTAATCTCGAATATACTAGTACCCGATCCGCACACTCGAATTTCAATCTCTTCAATTATGAGTGCTCCTTGGTTCCTAGATGGGTTTTCATCAACTTCAACTTGTTCTTCTCCTCATCATCAACCATGGGAAAACAAACTAGCTTCACGAGTTCATCACCCTTTGTCATCGTCATCGCCCAAGTTCTTCAATGCCTTTGAGTTCATCTCAACCATGTCTTCAGGGTTCGATCTTTCGGGATTGTTTGAGGATAAGAGAAGAACAAGTTCTATCTTCACTTCCAAGTGTTCTCCTTCGGTGATACTATCCAAAATCGATAGCATGGCGAAGGATTTAAGGTTCAAGATAGAAAAGGGGAAGGACTCCCAGGTGAGGTTGCAAGCGCCTTCCGAGGGGAGGAGCGGGAGGCTATTGGTGGCAGCCGAGGTGTTCAAGGTGGCTGAGGAGGTGGCAGTGGTGGAATTCTCCAAGTGCTCCGGGGACACTTTGGAGTATGAGAAGCTTTGTGAGGAACAAATTAGGCCAGCGTTGAAAGATATTGTTTGGACATGGCAAGGTGAATATTGTGAAGAATTTTCAAAGTCTAGTTAG 1314 0.4452 MEVENKTLFGKYQIGRLLGKGTFGRVNYGKEIATGESVAIKVINKSKVKKEGMVDQIQREISVMHLVRHPNIVDLREVLATKTKIFFVMEYARGGELFAKVVKGRLSEELARKYFQQLISAVAFCHSCGVSHRDLKPENLLLDENENLKVSDFGLSALPEQLWNDGLLHTQCGTPSYVAPEILRKKGYDGSKADIWSCGIILYALLAGYLPFQHENLIYLYTKLLKAEFEFPPWFSLESRTLISNILVPDPHTRISISSIMSAPWFLDGFSSTSTCSSPHHQPWENKLASRVHHPLSSSSPKFFNAFEFISTMSSGFDLSGLFEDKRRTSSIFTSKCSPSVILSKIDSMAKDLRFKIEKGKDSQVRLQAPSEGRSGRLLVAAEVFKVAEEVAVVEFSKCSGDTLEYEKLCEEQIRPALKDIVWTWQGEYCEEFSKSS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213174g00002 437 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 420 - -
Stsc213174g00002 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc213174g00002 437 CDD CIPK_C 305 419 - -
Stsc213174g00002 437 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Stsc213174g00002 437 ProSiteProfiles NAF domain profile. 299 324 IPR018451 GO:0007165
Stsc213174g00002 437 FunFam Non-specific serine/threonine protein kinase 5 293 - -
Stsc213174g00002 437 Gene3D Kinase associated domain 1, KA1 303 424 - -
Stsc213174g00002 437 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc213174g00002 437 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc213174g00002 437 FunFam Non-specific serine/threonine protein kinase 299 423 - -
Stsc213174g00002 437 SUPERFAMILY Protein kinase-like (PK-like) 9 300 IPR011009 -
Stsc213174g00002 437 Gene3D Transferase(Phosphotransferase) domain 1 3 302 - -
Stsc213174g00002 437 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Stsc213174g00002 437 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc213174g00002 437 Pfam NAF domain 301 359 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213174g00002 Stsc-Chr213174 4067 5380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213174g00002 6 428 CBL-interacting serine-threonine protein kinases AT5G25110 64.103 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc213174g00002 Pkinase 4.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213174g00002 - - pvy:116138002 583.948