Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213160g00001 ATGAATGTGCCATTTCTACAGAAGTGCAGACACATAGAACATGCATCAAGAAATAATAATGATGAAGAGAACACCCTAATAATAACTACTAGTGGTGATGAAAATTCATCATCGTCTACCTCAGGATCCGCCACTTTCTTCAGAACCTGTCTCAATGGACTCAACGCACTATCAGGAGTGGGTATACTGTCGATTCCATATGCCCTTGCATCAGGAGGATGGCTAAGCATAATTCTTCTTTTCGCAATAGCCATGGCTGCATTTTACTCCGGAATCTTGATGAAGCGCTGCATGGACTCCAACCATAACATCAAAACCTACCCGGAAATAGGCCACCTAGCATTCGGAAACCTCGGCAGAACCGCCGTATCCCTCTCCATGTACACCGAGCTCTACTTAGTCGCCACCGGATTCTTGATTCTTGAAGGTGACAACTTGGATAACTTGTTCCCAAACACGGAGATAATGGGCTCAATTATTGGCGGGAAAAAGCTCTTTGTGGTGGTTGTTGGGATTATTATTATGCCAACCGTTTGGCTTGACGACTTGAGCCTTCTTTCTTATGTGTCTGGGAGTGGGGTTGTTGCTTCTGGTGTGATCGTAGTTGCAGTTTTCGTTACTGGAGTCGTTGATGAATCAGTTGGATTCAGAGAAAAGGGAAGGGTTGTTGATCTTGGTGGGACCCCTACGGCGGTTAGCTTGTATGCGTTTTGTTACTGTGCGCATCCCGTGTTTCCTAGCTTGTACAATTCCATCAAGGACAAGAAACAGTTCTCCAAGGTTCTACTTGTATGCTTTGTGTTAAGCACAGCAGCGTATGCATTCATGGCAATCATAGGTTACCTAATGTTTGGTTCCAAAGTGGAATCACAAATAACACTAAACCTTCCCAAGAACAAAATAACCTCTCAAATTGCAATATACACTACACTGCTGAACCCCATAGCTAAATACGCTTTGATGGTTACACCAATCACCAATGCATTAAAATCCTTGCTTCCACCACAACACATGAACAACAGATTCATTACCATCTCAATAAGCACTGCATTGGTGTTCAGCACCGTCGCCGTCGCCGTGGCGGTTCCGTTCTTTGGCTCGCTTACTTCTCTCGTTGGAGCGTTCTTGAGCGTAACGGCTTCAATTATAATGCCATGTGCTTGCTACTTGAAGATTTCGGGTACTTATAAGGAACTTGGTTTTGAGACCGTTGCTATAGTCACCATAATATTGATCGGTGTGGTTATTGGAGTTTTTGGTACTTATAATGCATTGGCAGAAATAATCAATCAACTTTAG 1299 0.4357 MNVPFLQKCRHIEHASRNNNDEENTLIITTSGDENSSSSTSGSATFFRTCLNGLNALSGVGILSIPYALASGGWLSIILLFAIAMAAFYSGILMKRCMDSNHNIKTYPEIGHLAFGNLGRTAVSLSMYTELYLVATGFLILEGDNLDNLFPNTEIMGSIIGGKKLFVVVVGIIIMPTVWLDDLSLLSYVSGSGVVASGVIVVAVFVTGVVDESVGFREKGRVVDLGGTPTAVSLYAFCYCAHPVFPSLYNSIKDKKQFSKVLLVCFVLSTAAYAFMAIIGYLMFGSKVESQITLNLPKNKITSQIAIYTTLLNPIAKYALMVTPITNALKSLLPPQHMNNRFITISISTALVFSTVAVAVAVPFFGSLTSLVGAFLSVTASIIMPCACYLKISGTYKELGFETVAIVTIILIGVVIGVFGTYNALAEIINQL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213160g00001 432 PANTHER AMINO ACID TRANSPORTER 33 422 - -
Stsc213160g00001 432 Pfam Transmembrane amino acid transporter protein 44 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213160g00001 Stsc-Chr213160 1629 4457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213160g00001 33 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.383 4.20e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213160g00001 K15015 - gmx:100794374 494.197