Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213145g00004 GGAAACAAGAAGCATTTCCCTCCATCACCTAAGGACAAAATATGGCGATTGGTAAACATATCAAAAGGTGGAAACGTCCATAAGCGCCTCTCCCAGGACCTTCAAATCAAAACTGTTGAGGATCTCTTGGGCTTTAACAACCAAACCCATCTAATACCTTTATTGCACAAGACATTTGGCCAAAGTTCAAGAAAGCTGCGTGAAACAATTAAGCATGCTAAGAGTTGTTATCCTCCTCCGCCGCCGTCAGTTACATGTCAAGGACAAAAGTGTCTTTCACAGAATATTCTCAACTCCTATCATCATCGTCATGAAAGGCAGCATGTTGAGGAGACAGCGGCACTGCTTCACACCTTTTCAGGTCCAATGGGAAGTCTACAACAAGAAGATTAA 393 0.43 GNKKHFPPSPKDKIWRLVNISKGGNVHKRLSQDLQIKTVEDLLGFNNQTHLIPLLHKTFGQSSRKLRETIKHAKSCYPPPPPSVTCQGQKCLSQNILNSYHHRHERQHVEETAALLHTFSGPMGSLQQED 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213145g00004 130 PANTHER OS02G0177800 PROTEIN 2 106 IPR012416 GO:0005516
Stsc213145g00004 130 Pfam Calmodulin binding protein central domain 10 76 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213145g00004 Stsc-Chr213145 10729 12663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213145g00004 3 76 Calmodulin-binding Proteins AT2G24300 42.105 1.30e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213145g00004 - - aip:107645946 173.711