Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213122g00002 ATGGATTTCGTTGAAGGTGTCGGAGAGAGCTCGTCGCCGCCGCGGACGTTCGGCGGTTTCAGCAACTACGACATCAGGAACGATGTGTACAACCGCTTGGTGGAAACCGGCCACGATCAGGCTGTGTCGAATCCCGATTTTCGGGAACTGCTTGAAGCTCACTTCAATCGCTTGCCTCCGAGTTATGGACTTGATGTTAATGTGGATAGAGCTGAAGATGTTCTATTGCATCAGAGTCTTCTTAGTTTGGCAAGGGACCCGGAAAAGCGTCCTGTCATCCATGTACGCTTCTTGGAGAACATTTCAGCTCAGGCAGATGGGGAAGAACAAGAAACTGCAAGTACTCATTCTAGTCCGGGGCCATCTAGTCATGCAACTAATGGAGGAGCTGTATCATCTCATAAGAGGACAAGGGATCATGCAACTGACTTTGAGCCTTGGTCAAAGCTTGAAGGCCTAAATTTGGATGTTGGAAAGAACTCCAAGGATATAGAGGAAAGATTTCTTACTGACAGCCTATCCCAGAGGCAGGAGAATTCAAATTTCCCAATACATGAAGTGATATTTTCCACTCTTGACAAGCCAAAGCTTTTAAGTCAGGAAACAGCTGGTTTGTATGAAGCTATGGAAAAAGCAGTTGCAAGAAGTGAGGGATCATGGTCACGCTCTTCAAATTCGCTTTCAGTTGTGGAGAAACCCTTAGCTGCAGAAGCAAAATGTGGAGATTGGGAGATAGACAAGAGGTTGTTAAAGATAGGAGACAGAATAGCATCTGGATCCTGTGGAGATTTGTATCATGGGGTTTATCTAGGGCAAGATGTTGCTGTTAAAGTTATGAGATCCGAGCAACTAAATGATGCTTTGGAGGATGAATTTGCTCAAGAAGTTACAATTCTTAAGCAGGTGCACCATAAAAATGTTGTTCGTTTCATTGGTGCATGTACAAAGTCTCCGAATTTGTGTATAGTAACAGAGTATATGCCCGGAGGAAGTCTGTATGATTACCTGCACAAAAACCACAATGTCTTGGAGCTGTCTCCCTTACTGAAGTTTGCAATTGATGTTTGCAAGGGTATGGAGTATTTACATAGAAACAACATAATTCACAGGGATTTGAAGACAGCAAATCTGCTGATGGATACAGACAATGTTGTTAAAGTAGCAGATTTCGGCGTTGCTCGTTTCCTTAATCAGGAGGGAGTGATGACAGCAGAAACTGGGACATATAGATGGATGGCACCAGAGGTTATCAACCATCAGCCTTACGATCAGAAAGCAGATGTGTTCAGTTTTTCCATAGTACTCTGGGAACTAGTGACTGCAAAGGTGCCTTATGATACATTGACTCCACTACAAGCAGCCTTGGGTGTTAGACAGGGACTCCGCCCAGAACTTCCAAAGCATGGGCACCCTAAACTATTGTACTTGATGCAAAGATGTTGGGAAGCAGAACCAAGCAACCGGCCGAGTTTCGAGGAGATATCAGTTGAACTTGAGAATATCTTACAAGAAGTTGAGAATGATTCACAAGCTAATGGTGCTTAA 1545 0.4401 MDFVEGVGESSSPPRTFGGFSNYDIRNDVYNRLVETGHDQAVSNPDFRELLEAHFNRLPPSYGLDVNVDRAEDVLLHQSLLSLARDPEKRPVIHVRFLENISAQADGEEQETASTHSSPGPSSHATNGGAVSSHKRTRDHATDFEPWSKLEGLNLDVGKNSKDIEERFLTDSLSQRQENSNFPIHEVIFSTLDKPKLLSQETAGLYEAMEKAVARSEGSWSRSSNSLSVVEKPLAAEAKCGDWEIDKRLLKIGDRIASGSCGDLYHGVYLGQDVAVKVMRSEQLNDALEDEFAQEVTILKQVHHKNVVRFIGACTKSPNLCIVTEYMPGGSLYDYLHKNHNVLELSPLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTDNVVKVADFGVARFLNQEGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTLTPLQAALGVRQGLRPELPKHGHPKLLYLMQRCWEAEPSNRPSFEEISVELENILQEVENDSQANGA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213122g00002 514 MobiDBLite consensus disorder prediction 103 145 - -
Stsc213122g00002 514 SUPERFAMILY Protein kinase-like (PK-like) 237 503 IPR011009 -
Stsc213122g00002 514 Gene3D Phosphorylase Kinase; domain 1 238 327 - -
Stsc213122g00002 514 Gene3D Transferase(Phosphotransferase) domain 1 328 513 - -
Stsc213122g00002 514 Pfam Protein tyrosine and serine/threonine kinase 250 497 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 SMART serkin_6 250 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc213122g00002 514 CDD STKc_MAP3K-like 256 498 - -
Stsc213122g00002 514 ProSiteProfiles Protein kinase domain profile. 250 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc213122g00002 514 PRINTS Tyrosine kinase catalytic domain signature 324 337 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 PRINTS Tyrosine kinase catalytic domain signature 426 448 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 PRINTS Tyrosine kinase catalytic domain signature 407 417 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 PRINTS Tyrosine kinase catalytic domain signature 361 379 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Stsc213122g00002 514 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 111 505 - -
Stsc213122g00002 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Stsc213122g00002 514 MobiDBLite consensus disorder prediction 105 132 - -
Stsc213122g00002 514 FunFam Serine/threonine-protein kinase isoform 1 241 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213122g00002 Stsc-Chr213122 3642 10400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213122g00002 24 510 MAP Kinase Kinase Kinase AT4G35780 45.149 2.05e-152 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc213122g00002 PK_Tyr_Ser-Thr 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213122g00002 - - gmx:100797987 826.239