Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213108g00003 ATGATTGAAATGAATTCAAAGAAAAGGATATTCAATCTCAAAGGAATAGCATTGGGTAATCCAGTTCTAGAATACAGCACAGACTTCAATTCAAGGGCTGAGTTCTTTTGGTCACATGGGCTAATATCAGATTCTACATACAACATGTTCACCAAAGTGTGTAACTATTCAAGATATGTGAGTGAATATTATAGAGATTCACTTTCCATGGTTTGTTCAGAGGTAATGGGACAAGTTAGCAGAGAAACAAGCAAATTTGTGGACAAATATGATGTCACTCTTGATGTTTGCATTTCCTCAGTTCTTTCACAATCAAAGATTATTTGTCCTCAATCCCAAGAAAAGAATGAGAGGGTAGATGTGTGTGTAGATGACAAGGTCACAAACTACTTGAATAGAAGAGATGTACAACAATCACTTCATGCCAAGCTTGTTGGAGTAAGAAAATGGGATGTTTGTAGCAACATATTGGATTATGATATGGTGAATGTGGAAATTCCTACACTTCCTATTGTTGGATCACTAGTAAAAGCTGGAGTTAGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTGATTCCATTGACTGGAAGCCGGACTTTGGTTCAAAAATTGGCAAAACAATTAAAACTTAATACAACAGTCCCTTATAGTGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAACAATATGCTTTCATTTGCCACAGTAAGAGGGGCAGCACATGAAGCACCTTTCTCACAGCCTGAAAGATCATTTGTGCTTTTCAATTCATTCCTTCAAGGCAGAACTTTACCTCAAATTTTCTGA 828 0.3732 MIEMNSKKRIFNLKGIALGNPVLEYSTDFNSRAEFFWSHGLISDSTYNMFTKVCNYSRYVSEYYRDSLSMVCSEVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKIICPQSQEKNERVDVCVDDKVTNYLNRRDVQQSLHAKLVGVRKWDVCSNILDYDMVNVEIPTLPIVGSLVKAGVRVLIYSGDQDSVIPLTGSRTLVQKLAKQLKLNTTVPYSVWFEGQQVGGWTQVYGNNMLSFATVRGAAHEAPFSQPERSFVLFNSFLQGRTLPQIF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213108g00003 275 Gene3D alpha/beta hydrolase 1 108 IPR029058 -
Stsc213108g00003 275 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 255 IPR001563 GO:0004185|GO:0006508
Stsc213108g00003 275 FunFam Carboxypeptidase 168 268 - -
Stsc213108g00003 275 Gene3D - 122 158 - -
Stsc213108g00003 275 Gene3D - 168 268 - -
Stsc213108g00003 275 Pfam Serine carboxypeptidase 6 268 IPR001563 GO:0004185|GO:0006508
Stsc213108g00003 275 SUPERFAMILY alpha/beta-Hydrolases 7 271 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213108g00003 Stsc-Chr213108 9956 13005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc213108g00003 130 271 Calmodulin-binding Proteins AT2G22960 27.465 4.61e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213108g00003 K16297 - gmx:100795668 496.508