Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc213025g00002 ATGGCTGATTCAGTTTCGAATCCATCAATTCAACGTGAATTGAGTCTGAATTCTGCAGCAGAGGGGATCGTCGAGGGTTTGTCTCATGTTGATGAAGAGTACATTCCAAAGGTTGGGATGACTTTTCTAACAATTGAAGAAGCTAATGTTTTCTATAAAGAGTATGCTAAACGAGCAGGCTTTGCTACTAAAATCAGGAATTCGAATAAGAATAAAGATACCGGTGCAATCAAGAATCAGCTTATCACATGTAATAGAGAGGGGAAAACGAAATCTGATTTACTTGAAGCTGAGAAGACTAATCCAATGTCTCCTACAAATTGCCCTGCAAGAGTTTATGTTCACATACAGAAGAAGTCTCAACTTTTTATTATTTCAAAGGTTGTTTGA 390 0.3718 MADSVSNPSIQRELSLNSAAEGIVEGLSHVDEEYIPKVGMTFLTIEEANVFYKEYAKRAGFATKIRNSNKNKDTGAIKNQLITCNREGKTKSDLLEAEKTNPMSPTNCPARVYVHIQKKSQLFIISKVV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc213025g00002 129 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 129 - -
Stsc213025g00002 129 Pfam FAR1 DNA-binding domain 51 125 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc213025g00002 Stsc-Chr213025 11881 12751 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc213025g00002 FAR1 8.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc213025g00002 - K17604 adu:110280446 122.864